Pairwise Alignments

Query, 239 a.a., Transcriptional regulator of the arabinose operon in Shewanella, GntR family from Pseudomonas fluorescens FW300-N2E2

Subject, 243 a.a., HTH-type transcriptional regulator LutR from Azospirillum sp. SherDot2

 Score = 95.1 bits (235), Expect = 1e-24
 Identities = 83/233 (35%), Positives = 121/233 (51%), Gaps = 20/233 (8%)

Query: 9   RKSMHARIVQELGMQIVSGRFKPDDKLPAEALLCEEYAVSRPVLREATRVLVAKGLVYSR 68
           R  +  ++V  L  +I SG+FK  D+LP+E  L +E+ VSR V+REA   L A G+V +R
Sbjct: 7   RDPLAKQLVDALAERISSGQFKSGDRLPSEQDLIDEFGVSRTVVREAIANLKAVGMVSTR 66

Query: 69  PRVGTVVKARREWHMLDPDVLHWLMQSS---PQNEFFNLLTSVRSIIEPAAAALAAQFAD 125
             +G  V       + D  +L + ++ S     NE  ++L  VR  +E  AA LAA   D
Sbjct: 67  QGLGAFV-------LRDAAILPFRIEESTLEAVNEAISVL-EVRISLESEAAYLAAIRRD 118

Query: 126 EADIAAIREAYQRMEAA-PTPEAVLQPDLDFHSRIADATHN-DLLANLCNMLSVAIAEA- 182
           +A +A +REA   M AA    E  ++ DL FHS IA AT N   LA    + S+ I  A 
Sbjct: 119 DAQLARMREALDTMTAAVEAGEDAIEADLAFHSAIAAATGNKHFLALFSYLGSLLIPRAR 178

Query: 183 -----LKHSNQRPNLHELAMPRHKAILTAIENRDALGARHATLVQLDDARSAL 230
                L+  ++R  L  +    H+ I +AIE +D  GAR A  + L+ +R  L
Sbjct: 179 VRYGHLEGDSRRQYLRRI-NDEHQTIYSAIERQDPEGARAAIRLHLNGSRDRL 230