Pairwise Alignments

Query, 267 a.a., D-galactonate regulator, IclR family from Pseudomonas fluorescens FW300-N2E2

Subject, 284 a.a., DNA-binding transcriptional repressor YiaJ from Azospirillum sp. SherDot2

 Score =  239 bits (610), Expect = 5e-68
 Identities = 130/266 (48%), Positives = 170/266 (63%), Gaps = 10/266 (3%)

Query: 5   DPKITKDAAPTGTQTLLRGLGVVQAVASGARDLKEIARLIGTTRSTTHRLASCLVDERYL 64
           DP   +     GTQTLLRGL  ++ VA+G  ++K IA  + T RST HR+ + LV E YL
Sbjct: 16  DPATPERRQAAGTQTLLRGLAAIECVATGTTEVKGIAARLNTPRSTVHRMLNSLVAEGYL 75

Query: 65  RVVPQVGYLLGPKLIELGFQAREELPLVSLAGPYLDELSALTGDTVHLAIREGDEVLYLL 124
             VP  GYLLGPKLIELG +A E+ PLV+LA P+++ L+  TGDTVHL + +GD V YL 
Sbjct: 76  HHVPYKGYLLGPKLIELGMKALEQRPLVALARPHIEALAQRTGDTVHLGVVDGDAVFYLD 135

Query: 125 KNPGRNGPEMRSRVGHRMPLARTGIGKALMLDDSQEQWKRLYEISLPA----GGKNQFWP 180
           K P   G EMRSRVG RMPLA TGIGKALML     +W+ L++    A    GG+    P
Sbjct: 136 KIPSTRGLEMRSRVGLRMPLASTGIGKALMLGMPPSRWRELHDAVATAPDTVGGRPGPLP 195

Query: 181 QHQEQSWEQFQQRMLEYVAGGYAFDLEDNEPSIRCVAAPIRDAGKRIVAGISIASTVPYM 240
                 W ++++ M  ++   +  DLE+NE  +RCV AP+RD   ++VA IS+AS VPYM
Sbjct: 196 ------WPKYEKLMAGFLRRDWVLDLEENEIGVRCVGAPVRDISNQVVAAISVASAVPYM 249

Query: 241 PLEKMAELIPLVKGVTARLSAELGAK 266
           P E+MAEL P+V+     +S ELG K
Sbjct: 250 PDERMAELGPVVRAAADAISKELGWK 275