Pairwise Alignments

Query, 322 a.a., ABC transporter for D-galactose/L-arabinose, permease component (from data) from Pseudomonas fluorescens FW300-N2E2

Subject, 321 a.a., arabinose ABC transporter permease from Pseudomonas simiae WCS417

 Score =  542 bits (1397), Expect = e-159
 Identities = 274/305 (89%), Positives = 292/305 (95%)

Query: 18  RRFLDDWVMLLAAIGIFVLCTLMIDNFLSPLNMRGLGLAISTTGIAACTMLYCLASGHFD 77
           R+FLDDWVMLLAA+ IFVL  L IDNFLSPLNMRGLGLAIST GIAACTML+CLASGHFD
Sbjct: 17  RKFLDDWVMLLAALSIFVLSALFIDNFLSPLNMRGLGLAISTVGIAACTMLFCLASGHFD 76

Query: 78  LSVGSVIACAGVVAAVVMRDTNSVFLGISAALVMGLIVGLINGIVIAKLRVNALITTLAT 137
           LSVGSVIACAGVVA +V+RDT+SV LG+SAAL MGL+VGLINGIVIAKLR+NALI TLAT
Sbjct: 77  LSVGSVIACAGVVAGIVIRDTDSVVLGVSAALAMGLVVGLINGIVIAKLRINALIATLAT 136

Query: 138 MQIVRGLAYIFANGKAVGVSQESFFVFGNGQMFGVPVPILITIVCFLFFGWLLNYTTYGR 197
           MQIVRGLAYIF+NGKAVGV  E FFVFGNGQ+ GVPVPI+IT++CF+FFGWLLNYTTYGR
Sbjct: 137 MQIVRGLAYIFSNGKAVGVMDEGFFVFGNGQLLGVPVPIIITVLCFVFFGWLLNYTTYGR 196

Query: 198 NTMAIGGNQEAALLAGVNVDRTKIIIFAVHGVIGALAGVILASRMTSGQPMIGQGFELTV 257
           NTMAIGGNQEAALLAGVNVDRTKIIIFAVHG+IGALAGVILASRMTSGQPMIGQGFELTV
Sbjct: 197 NTMAIGGNQEAALLAGVNVDRTKIIIFAVHGLIGALAGVILASRMTSGQPMIGQGFELTV 256

Query: 258 ISACVLGGVSLSGGIGMIRHVIAGVLILAIIENAMNLKNIDTFYQYVIRGSILLLAVVID 317
           ISACVLGGVSLSGGIGMIRHVIAGVLILAIIENAMNLKNIDTFYQYVIRGSILLLAV+ID
Sbjct: 257 ISACVLGGVSLSGGIGMIRHVIAGVLILAIIENAMNLKNIDTFYQYVIRGSILLLAVIID 316

Query: 318 RLKQR 322
           R+KQR
Sbjct: 317 RMKQR 321