Pairwise Alignments

Query, 322 a.a., ABC transporter for D-galactose/L-arabinose, permease component (from data) from Pseudomonas fluorescens FW300-N2E2

Subject, 328 a.a., ABC transporter permease from Paraburkholderia sabiae LMG 24235

 Score =  194 bits (494), Expect = 2e-54
 Identities = 109/318 (34%), Positives = 177/318 (55%), Gaps = 4/318 (1%)

Query: 2   TIQNN-ALPTARKPLDLRRFLDDWVMLLAAIGIFVLCTLMIDNFLSPLNMRGLGLAISTT 60
           T+QN    PT R+  D    L  + ++   +G+  + T +  +FL  +N+  +   I+  
Sbjct: 4   TVQNQPTTPTHRR--DFLAVLKSYGLVWVLLGLCAIATWLSPSFLGVMNLVNVLRQIALL 61

Query: 61  GIAACTMLYCLASGHFDLSVGSVIACAGVVAAVVMRDTNSVFLGISAALVMGLIVGLING 120
           GI    M + + +   DLSVGS++    VV A+++     V+L + AA+ +GL++G ING
Sbjct: 62  GIVGIGMTFVILARGIDLSVGSIVGLIAVVTALMLTQGYPVYLCVLAAIALGLVLGAING 121

Query: 121 IVIAKLRVNALITTLATMQIVRGLAYIFANGKAVGVSQESFFVF-GNGQMFGVPVPILIT 179
           + IA  R+ A I TL +M + RG+A   ANG+ + V     F F G+G    +PV + + 
Sbjct: 122 LGIAIGRLPAFIMTLGSMVMFRGMALSIANGQPINVGDAPGFDFIGSGDFLQIPVVVWLF 181

Query: 180 IVCFLFFGWLLNYTTYGRNTMAIGGNQEAALLAGVNVDRTKIIIFAVHGVIGALAGVILA 239
               L    +L YT++GR   A+G N EAA LAG+N      I++ + G+  A+  ++  
Sbjct: 182 AAIALLAFLVLRYTSFGRYVYAVGSNTEAAHLAGINTRVISFIVYVISGLAAAITAIVYV 241

Query: 240 SRMTSGQPMIGQGFELTVISACVLGGVSLSGGIGMIRHVIAGVLILAIIENAMNLKNIDT 299
           SR+T G+P  G G EL  I+  V+GG SL GG G +   + G  I+A++ N MNL  I  
Sbjct: 242 SRLTVGEPTAGTGLELEAIAVTVIGGTSLFGGEGGVMGTVLGAAIIAVLANVMNLLGISP 301

Query: 300 FYQYVIRGSILLLAVVID 317
           F Q +I+G+I+++AV+ +
Sbjct: 302 FTQQIIKGAIIIVAVLFE 319