Pairwise Alignments

Query, 322 a.a., ABC transporter for D-galactose/L-arabinose, permease component (from data) from Pseudomonas fluorescens FW300-N2E2

Subject, 328 a.a., arabinose ABC transporter permease AraH from Escherichia coli ECRC99

 Score =  382 bits (981), Expect = e-111
 Identities = 189/304 (62%), Positives = 238/304 (78%)

Query: 19  RFLDDWVMLLAAIGIFVLCTLMIDNFLSPLNMRGLGLAISTTGIAACTMLYCLASGHFDL 78
           R  D + ML+    +F+ C + + NF + +NM+GLGLAIS +G+ AC ML+CLASG FDL
Sbjct: 20  RIWDQYGMLVVFAVLFIACAIFVPNFATFINMKGLGLAISMSGMVACGMLFCLASGDFDL 79

Query: 79  SVGSVIACAGVVAAVVMRDTNSVFLGISAALVMGLIVGLINGIVIAKLRVNALITTLATM 138
           SV SVIACAGV  AVV+  T S+++G++A L++G++ GL+NG VIAKL++NALITTLATM
Sbjct: 80  SVASVIACAGVTTAVVINLTESLWIGVAAGLLLGILCGLVNGFVIAKLKINALITTLATM 139

Query: 139 QIVRGLAYIFANGKAVGVSQESFFVFGNGQMFGVPVPILITIVCFLFFGWLLNYTTYGRN 198
           QIVRGLAYI ++GKA+G+  ESFF  G    FG+P PI +T+ C + FG LLN TT+GRN
Sbjct: 140 QIVRGLAYIISDGKALGIEDESFFALGYANWFGLPAPIWLTVACLIIFGLLLNKTTFGRN 199

Query: 199 TMAIGGNQEAALLAGVNVDRTKIIIFAVHGVIGALAGVILASRMTSGQPMIGQGFELTVI 258
           T+AIGGN+EAA LAGV V RTKIIIF + G++ A+AG+ILASRMTSGQPM   G+EL VI
Sbjct: 200 TLAIGGNEEAARLAGVPVARTKIIIFVLSGLVSAIAGIILASRMTSGQPMTSIGYELIVI 259

Query: 259 SACVLGGVSLSGGIGMIRHVIAGVLILAIIENAMNLKNIDTFYQYVIRGSILLLAVVIDR 318
           SACVLGGVSL GGIG I +V+AG+LIL  +ENAMNL NI  F QYV+RG ILL AV+ DR
Sbjct: 260 SACVLGGVSLKGGIGKISYVVAGILILGTVENAMNLLNISPFAQYVVRGLILLAAVIFDR 319

Query: 319 LKQR 322
            KQ+
Sbjct: 320 YKQK 323