Pairwise Alignments

Query, 322 a.a., ABC transporter for D-galactose/L-arabinose, permease component (from data) from Pseudomonas fluorescens FW300-N2E2

Subject, 344 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  190 bits (483), Expect = 4e-53
 Identities = 116/331 (35%), Positives = 178/331 (53%), Gaps = 17/331 (5%)

Query: 3   IQNNALPT---ARKPLDLRRFLDDWVMLLAAIGIFVLCTLMIDNFLSPLNMRGLGLAIST 59
           +    LPT    R  +D   F + + + +  I + +   L   NFL+  N+  +   +S 
Sbjct: 5   LSRTKLPTPANGRGRIDPIAFFERFGVFIFMILLLIFFQLQNSNFLTERNITNILTEVSI 64

Query: 60  TGIAACTMLYCLASGHFDLSVGSVIACAGVVAAVVMRDTN------------SVFLGISA 107
            GI A  M + + +   DLSVGS++A   + AA V++  N            S  +G+  
Sbjct: 65  YGIMAVGMSFVILTAGIDLSVGSILAVCAMTAAYVIKGDNFTTVDAQAWGGMSWLVGLGI 124

Query: 108 ALVMGLIVGLINGIVIAKLRVNALITTLATMQIVRGLAYIFANGKAVGVSQESFFVFGNG 167
            L MG  +G ++G+ + +LR++  I TL  M I RGL  +  +G  +      +  +G G
Sbjct: 125 CLAMGTAIGFLHGLGVTRLRLSPFIVTLGGMTIWRGLTLVVNDGAPIAGFDPGYRWWGRG 184

Query: 168 QMFGVPVPILITIVCFLFFGWL-LNYTTYGRNTMAIGGNQEAALLAGVNVDRTKIIIFAV 226
           ++ GV +PI I  +  L  GWL L+ T +GR   AIGGN EAA LAGVNV R  + ++ V
Sbjct: 185 ELLGVSIPIWIFALVALI-GWLALHKTRWGRFVYAIGGNTEAARLAGVNVQRVLVSVYVV 243

Query: 227 HGVIGALAGVILASRMTSGQPMIGQGFELTVISACVLGGVSLSGGIGMIRHVIAGVLILA 286
            G +  LAG IL++R+ S + + G  FEL VI++ V+GG SL GG G I   I G +I+ 
Sbjct: 244 IGALAGLAGFILSARLGSAEAVAGISFELRVIASVVIGGTSLMGGYGRISGTIIGSVIMG 303

Query: 287 IIENAMNLKNIDTFYQYVIRGSILLLAVVID 317
           I+ N + L N+  +YQ +I G I++LAV  D
Sbjct: 304 ILINGLVLMNVSAYYQQIITGLIIVLAVAFD 334