Pairwise Alignments

Query, 466 a.a., Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 406 a.a., murein transglycosylase D from Escherichia coli ECOR38

 Score =  290 bits (743), Expect = 5e-83
 Identities = 170/410 (41%), Positives = 245/410 (59%), Gaps = 25/410 (6%)

Query: 55  DVWERMRQGFQLQETAGVNPRIEQQRLWFASNPSFMENAGERGSLYIHYIVERLEERNMP 114
           D+W  +  G +L+     N RI +Q+  +  N S++ +   R   Y+++I  ++++RNMP
Sbjct: 12  DLWAFI--GDELKMGIPENDRIREQKQKYLRNKSYLHDVTLRAEPYMYWIAGQVKKRNMP 69

Query: 115 LELALLPVIESAYNPMAYSRANAVGLWQFIPSTGRYFNLRQTRFYDGRRDITASTTAALD 174
           +EL LLP++ESA++P A S ANA G+WQ IPSTGR + L+QTR YD RRD+ ASTTAAL+
Sbjct: 70  MELVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNYDARRDVVASTTAALN 129

Query: 175 YLTRLHDMFNGDWLLALAAYNAGEGTVSRAIERNEKLGLPTDYWNLPLPSETQAYVPKLL 234
            + RL+ MF+GDWLL +AAYN+GEG V +AI+ N+  G  TD+W+LPLP ET+ YVPK+L
Sbjct: 130 MMQRLNKMFDGDWLLTVAAYNSGEGRVMKAIKTNKARGKSTDFWSLPLPQETKQYVPKML 189

Query: 235 ALSQVVLSPDAYGVNLNPIANEPYFQVVEINQRMDLSKVAAVANIDEDELFQLNPAFKQR 294
           ALS ++ +   YGV L           V ++  ++++KVA +A I   +L   N   K  
Sbjct: 190 ALSDILKNSKRYGVRLPTTDESRALARVHLSSPVEMAKVADMAGISVSKLKTFNAGVKGS 249

Query: 295 TT-IDGPQHLLVPTSKAQLLTASLSTMRPEELISQRALKPVFESADDSEVEGARRTYRVK 353
           T    GPQ+++VP   A  L  SL++   E    Q  L      AD++ +    R Y V+
Sbjct: 250 TLGASGPQYVMVPKKHADQLRESLAS--GEIAAVQSTL-----VADNTPLNS--RVYTVR 300

Query: 354 RGDNLAQIAKANNVQTKDLQRWNKLSGNKLKVGQTLVMQDAKASKARGKRISTVVAANSK 413
            GD L+ IA    V TKDLQ+WNKL G+KLK GQ+L +         G   S    AN+ 
Sbjct: 301 SGDTLSSIASRLGVSTKDLQQWNKLRGSKLKPGQSLTI---------GAGSSAQRLANNS 351

Query: 414 DQKKQTQYKVKQGDSLYVVAKRFNVEMQHLKRWNPRMGKALKPGQMLTVY 463
           D      Y+V++GDSL  +AKR  V ++ + RWN      L+PG  LT++
Sbjct: 352 D---SITYRVRKGDSLSSIAKRHGVNIKDVMRWNSDTAN-LQPGDKLTLF 397