Pairwise Alignments

Query, 304 a.a., Membrane protein, putative from Pseudomonas fluorescens FW300-N2E2

Subject, 303 a.a., Putative inner membrane protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  350 bits (899), Expect = e-101
 Identities = 185/300 (61%), Positives = 230/300 (76%), Gaps = 4/300 (1%)

Query: 1   MAGSSLLVLIDDIATVLDDVALMTKMAAKKTAGVLGDDLALNAQQVSGVRAERELPVVWA 60
           +AGSSLL L+DDIAT+LDD+++M K+AAKKTAGVLGDDL+LNAQQV+GVRA RELPVVW+
Sbjct: 1   LAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVTGVRANRELPVVWS 60

Query: 61  VAKGSFINKLILVPSALAISAFVPWLVTPLLMVGGAYLCFEGFEKLAHKF-LHSPAEEQA 119
           VAKGS INK+ILVP AL ISAF+PW +TPLLM+GGA+LCFEG EK+ H F      E+ A
Sbjct: 61  VAKGSLINKVILVPLALLISAFIPWAITPLLMLGGAFLCFEGVEKVLHTFEARKHKEDPA 120

Query: 120 EHAQLVEAVADPAVDLVAFEKDKIKGAVRTDFILSAEIIAITLGTVADAALTQQVIVLSG 179
           E  + +EA+A  A + +AFEKDK+KGAVRTDFILSAEI+AITLG VA A L  QV+VL+G
Sbjct: 121 ERQKRLEALA--AQNPLAFEKDKVKGAVRTDFILSAEIVAITLGIVAQAPLLNQVLVLAG 178

Query: 180 IAIVMTIGVYGLVAGIVKLDDLGLWLTQKPGQAAKSIGGAILSAAPYMMKSLSVIGTAAM 239
           IA+V+TIGVYGLV  IVKLDD+G WL +K    A+ +G  +L  AP++MK+LS++GT AM
Sbjct: 179 IALVVTIGVYGLVGIIVKLDDMGYWLAEKRSVLAQGVGKGLLIIAPWLMKALSIVGTLAM 238

Query: 240 FLVGGGILTHGVPVVHHWIEGVTASAGG-AGFIVPMLLNAVAGIVAGAAVLAGVMVVGKV 298
           FLVGGGI+ HG+  +HH IE      G      +P  LN V G + GA V+A V  V K+
Sbjct: 239 FLVGGGIVVHGIAPLHHAIEHFAQQQGAFMAHTIPAGLNLVLGFIIGAIVVALVKGVAKI 298