Pairwise Alignments

Query, 441 a.a., Flagellar hook protein FlgE from Pseudomonas fluorescens FW300-N2E2

Subject, 402 a.a., flagellar hook protein E (NCBI) from Escherichia coli BW25113

 Score =  248 bits (633), Expect = 2e-70
 Identities = 161/449 (35%), Positives = 234/449 (52%), Gaps = 57/449 (12%)

Query: 1   MSFNIGLSGLYAANKQLDVTGNNIANVATTGFKSSRAEFEDVYSATKLGSGSKTVGNGVR 60
           M+F+  +SGL AA   LDV GNNIAN AT GFKS  A F D+++ +K       VG GV+
Sbjct: 1   MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------VGLGVK 53

Query: 61  LANVSQQFGQGDVNNTGNVLDMGIQGQGFF-VLSNDGSLSYTRAGTFKTDKEGFITNSDG 119
           +A ++Q F  G   NTG  LD+ I   GFF ++ ++GS+ Y+R G FK D+   + N  G
Sbjct: 54  VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113

Query: 120 TARLQGYGVDANGK---IQNGIL-TDLRIDTSNLPPQATSLVSSTINLNST-ATPITVAF 174
              LQ  G  A G    IQ G   T++ I  + +  + T+  S  INLNS+   P    F
Sbjct: 114 ---LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170

Query: 175 NPTDTATFTKQFTTPVYDTQGNQHSMDQYMVKTAGNTWNVYTLIDGRNLNGSAPVAPNAP 234
           + ++  ++ K+ +  V+D+QGN H M  Y VKT  N W VYT  D  + N  A  A    
Sbjct: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQ-DSSDPNSIAKTA---- 225

Query: 235 VPSTMTFDSNGRLTQVSTPVPPTVPPTVPTPAPTISNDLNLVGWVPGTVTNG--TWTANG 292
             +T+ F++NG L                               V G + N   T   NG
Sbjct: 226 --TTLEFNANGTL-------------------------------VDGAMANNIATGAING 252

Query: 293 AGSSTITISMANTTQFNADTARSIPA-QNGYATGQITNLTIDGSGVLLANFSNNQTKPIG 351
           A  +T ++S  N+ Q N      +   QNGY  G + +  I+  G ++ N+SN QT+ +G
Sbjct: 253 AEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLG 312

Query: 352 QLALASFTNEQGLQPVGGTSWKETFASGIPGYDAPETGTLGSIVSNSLEESNVNLTNELV 411
           Q+ LA+F N +GL   G   W  T +SG+       TG  G++ + +LE SNV+L+ ELV
Sbjct: 313 QIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELV 372

Query: 412 ELIKAQSNYQANAKTISTQSTIMQTIIQM 440
            +I AQ NYQ+NA+TI TQ  I+ T++ +
Sbjct: 373 NMIVAQRNYQSNAQTIKTQDQILNTLVNL 401