Pairwise Alignments

Query, 240 a.a., Flagellar basal-body rod modification protein FlgD from Pseudomonas fluorescens FW300-N2E2

Subject, 231 a.a., flagellar basal body rod modification protein D (NCBI) from Escherichia coli BW25113

 Score =  120 bits (302), Expect = 2e-32
 Identities = 80/229 (34%), Positives = 113/229 (49%), Gaps = 18/229 (7%)

Query: 18  NSSVKTNNTSDTLGAVTGAATGKKELGKDAFLQLLVTQLKNQNPLEPQDNGEFVAQLAQF 77
           N+ V T ++S   G+            + +FL LLV QLKNQ+P  P +N E  +QLAQ 
Sbjct: 12  NTGVSTTSSSSLTGSNAADL-------QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64

Query: 78  SSLEGITTLNETVSGIAGNYNSSQALQASSLVGRSVIAPGDKAVVDTSKSLNGTVVVPT- 136
           S++ GI  LN T+  I+G  ++SQ+LQAS+L+G  V+ PG   +  T  S  G V   T 
Sbjct: 65  STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTG-SEEGAVTTTTP 123

Query: 137 -------SVSSVAVKIVDKDGKTVRTIDLGSQNAGNSAFIWDGKNDAGTVVESGTYTFAA 189
                  +   V   I DK+G  VRTID+G   AG  +F WDG    G+   +G+Y  A 
Sbjct: 124 FGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAI 183

Query: 190 STTIDGKATSLITNLPATVSSVTISQTGGELMLNLAGLGSIALSKVQTI 238
           S +  G          A V  V    +G    L+L   G+  L +V+ I
Sbjct: 184 SASNGGTQLVAQPLQFALVQGVIRGNSGN--TLDLGTYGTTTLDEVRQI 230