Pairwise Alignments

Query, 382 a.a., Probable Co/Zn/Cd efflux system membrane fusion protein from Pseudomonas fluorescens FW300-N2E2

Subject, 382 a.a., Multidrug efflux system, membrane fusion component from Pseudomonas sp. S08-1

 Score =  491 bits (1263), Expect = e-143
 Identities = 246/376 (65%), Positives = 307/376 (81%)

Query: 1   MLRRRMLIMLGVVLLVVLLLAGYKAFSIYQQIQMFSAPKPPVSVAVAKAIEQPWQARLPT 60
           ML RRMLIMLGVVL+VVL LA YK FSIYQQIQMFS P+P +SV+ A + E+PWQ+RLP 
Sbjct: 1   MLLRRMLIMLGVVLVVVLALAAYKGFSIYQQIQMFSGPQPAISVSAAVSEERPWQSRLPA 60

Query: 61  VGSLKALQGVDLSLEIAGTVQKVQFQSGQKVKAGQPLLQLDSEVESALLETAEADLGLAQ 120
           +G+LKA QGVDL+ E+ GTV++V FQSG+KV  GQPLLQLDSEVE A+L TAEA   LA+
Sbjct: 61  IGTLKAFQGVDLTSEVQGTVKEVLFQSGEKVTVGQPLLQLDSEVERAILSTAEAVRALAR 120

Query: 121 LDFGRGRQLVGSQAISKGEFDRLSAQLKKNQATVNQLKASLAKKQILAPFSGTIGIRQVD 180
           +++ RG+ L+  QAISK EFDRL+A+L K +A+V+QLKA L KK+ILAPF+GTIGIRQVD
Sbjct: 121 VEYQRGQDLIKRQAISKSEFDRLNAELLKAEASVSQLKAELDKKRILAPFAGTIGIRQVD 180

Query: 181 VGDYLASGTVIATLQDLSSLYVDFYVPEQTVPRLAVAQPVNVSVSAYPGQTFVGTISAIN 240
            G YL+ G+  ATLQDLS LYVDF++PEQ  P+LA+ Q V +SV+AYPG+ F G I A+N
Sbjct: 181 TGAYLSPGSYFATLQDLSKLYVDFFLPEQDFPQLAIGQRVRLSVAAYPGEVFEGEIGALN 240

Query: 241 PKVEDSTRNVLVRATLANPDGKLLPGMFANLQVILPDVAAGIVVPESAVTYTLYGNSMYV 300
           PKVE++TRNV +RATL NPD KLLPGMFANL+V+LP     +VVPE+A+TYTLYGNS+YV
Sbjct: 241 PKVEENTRNVQIRATLPNPDNKLLPGMFANLEVLLPGEKNQVVVPETAITYTLYGNSVYV 300

Query: 301 VAQKKAADGTVEKDDKGQPVLIAERRFVETGERRDGQVLVTKGVQSGDQVVIAGQIKLDN 360
           + +KK   G V KDDKGQ  L+ ERRFVETGERRDG VLV KG+++G++VV AGQ+KLDN
Sbjct: 301 IGEKKDDKGVVVKDDKGQAQLVVERRFVETGERRDGVVLVLKGLKAGERVVTAGQLKLDN 360

Query: 361 GTPIAVSDDKTLTEQN 376
           G  +A+ DD++LT+ N
Sbjct: 361 GAHVAIVDDQSLTQDN 376