Pairwise Alignments

Query, 208 a.a., DNA-binding response regulator, LuxR family from Pseudomonas fluorescens FW300-N2E2

Subject, 210 a.a., Transcriptional regulator of fimbriae expression FimZ (LuxR/UhpA family) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  150 bits (379), Expect = 2e-41
 Identities = 76/207 (36%), Positives = 138/207 (66%), Gaps = 4/207 (1%)

Query: 4   VLIVDDHPVIRLAVRLLMERHG-YEVVAETDNGVDALQFARELMPDIVILDIGIPKLDGL 62
           V+I+D+HP++R+++ +L+ ++   +VV +TD+   A+++ R    D+VILDI +P  DG 
Sbjct: 6   VIIMDEHPIVRMSIEVLLGKNSNIQVVLKTDDSRTAIEYLRTYPVDLVILDIELPGTDGF 65

Query: 63  EVIARLTAIPSPMKVLVLTSQAPGHFSMRCMQTGAAGYVCKQQDLTELLSAIKAVLSGYS 122
            ++ R+ +I    ++L L+S++   ++ R ++ GA G+V K++DL ++ +A+K +LSGYS
Sbjct: 66  TLLKRIKSIQEHTRILFLSSKSEAFYAGRAIRAGANGFVSKRKDLNDIYNAVKMILSGYS 125

Query: 123 YFPNQALHTVRSS-LGNASESDMVDRLSGREMMVLQQLARGKTNKEIADGMFLSNKTVST 181
           +FP++ L+ + ++        DM   LS RE+ VL+ LA G +NKEIA+ + LSNKT+S 
Sbjct: 126 FFPSETLNFISNTRTPKGGHHDM--PLSNREVTVLRYLANGMSNKEIAEQLLLSNKTISA 183

Query: 182 YKTRLLLKLNARSLVDLIELAQRNGLV 208
           +K  +  KL   S+V+LI+ A+ + L+
Sbjct: 184 HKANIFSKLGLHSIVELIDYAKSHELL 210