Pairwise Alignments

Query, 260 a.a., Uncharacterized isomerase yddE, PhzC-PhzF family from Pseudomonas fluorescens FW300-N2E2

Subject, 297 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

 Score = 83.2 bits (204), Expect = 6e-21
 Identities = 89/297 (29%), Positives = 137/297 (46%), Gaps = 54/297 (18%)

Query: 1   MQLAFHQVDAFSDRPFGGNPAMVYRLDGWLADDLMQKIAAEHNLAETAFLVR-EGQHWHI 59
           M+   + VDAF+ +PF GN A V      L++  MQ IA E   +ETAFL+  +     I
Sbjct: 1   MKPQVYHVDAFTSQPFRGNSAGVVFPADNLSEAQMQLIARELGHSETAFLLHSDDSDVRI 60

Query: 60  RWFTPTTEVPLCGHATLASAYVLFEVYHEPVGRLDFICKSGALSVTREGD----RLWLD- 114
           R+FTPT EVP+CGHAT+A+ YV  +V       +     +G   VT E      R+ L+ 
Sbjct: 61  RYFTPTVEVPICGHATVAAHYVRAKVLGLGNCTIWQTSLAGKHRVTIEKHNDDYRISLEQ 120

Query: 115 -FPAIVPAELGAS-LAVQSALGVEAVDVL----------SSNELFVVLESEQAVLDCKPD 162
             P   P   G +  A+ +AL +   D+L            +++ + L+ E  +    PD
Sbjct: 121 GTPGFEPPLEGETRAAIINALHLTEDDILPGLPIQVATTGHSKVMIPLKPEVDIDALSPD 180

Query: 163 MAALAKLP--------WPGAIVTAPGSKHDFVSRYFAPAIGINEDPVTGS---------T 205
           + AL  +         +P  I   PG K++   R F+PAIGI EDPVTG+          
Sbjct: 181 LNALTAISKKIGCNGFFPFQI--RPG-KNETDGRMFSPAIGIVEDPVTGNANGPMGAWLV 237

Query: 206 HCSLIP----------YWSKRLGKHGLTAYQCSARGGALFCRLEGERVKIGGNATLV 252
           H +++P          +  + LG+ G+     + R        + E+V I G A ++
Sbjct: 238 HHNVLPHDGNVLRVKGHQGRALGRDGMIEVTVTIRDN------QPEKVTISGTAVIL 288