Pairwise Alignments

Query, 280 a.a., Small-conductance mechanosensitive channel from Pseudomonas fluorescens FW300-N2E2

Subject, 280 a.a., mechanosensitive ion channel protein MscS from Pseudomonas simiae WCS417

 Score =  466 bits (1200), Expect = e-136
 Identities = 235/280 (83%), Positives = 260/280 (92%)

Query: 1   MDLNAEVDNLVKASQTWIPMIMEYGSRVLLAVITLAIGWWLINKVTQKLGALLALRNADL 60
           MDLNAEVD+L+K S++W+PMIMEYGSR LLAV+TLAIGWWLIN +T ++G LLALRNADL
Sbjct: 1   MDLNAEVDHLIKTSESWLPMIMEYGSRFLLAVVTLAIGWWLINVLTHRVGRLLALRNADL 60

Query: 61  ALQGFISTLANIILKILLIVSVASMIGVETTSFVAAIGAAGLAIGLALQGSLANFAGGVL 120
           ALQ FI++LANI LK++L+V+VASMIGV TTSFVAAIGAA LAIGLALQGSLANFAGGVL
Sbjct: 61  ALQHFITSLANIALKVMLVVNVASMIGVATTSFVAAIGAATLAIGLALQGSLANFAGGVL 120

Query: 121 ILLFRPFRIGDWIEAQGVAGTVDSIQIFHTVLRTGDNKTVIVPNGNLSNGIITNTNRQPT 180
           ILLFRPFRIGDWIEAQG +GTVDSIQIFHTVLRTGDNKTVI+PNG+LSNG+ITNTNRQPT
Sbjct: 121 ILLFRPFRIGDWIEAQGTSGTVDSIQIFHTVLRTGDNKTVIIPNGSLSNGLITNTNRQPT 180

Query: 181 RKVVFDVGVDYQADLQKAREVLLDLAKDERVLADPAPEAVISTLGDSSITVSLRIWVKTA 240
           RKVVFDVGVDY+ADLQKAREVLL+LAKD RVLADPA  AV+STLGDSSITVSLR W KTA
Sbjct: 181 RKVVFDVGVDYEADLQKAREVLLELAKDPRVLADPAAVAVVSTLGDSSITVSLRCWTKTA 240

Query: 241 DYWSVMFMLNEQARDRLKDAGIDIPFPQRVIRVVQEGAAQ 280
           DYW V+FMLNE ARDRLK AGIDIPFPQRVIRV+QE  A+
Sbjct: 241 DYWDVVFMLNELARDRLKAAGIDIPFPQRVIRVMQETVAK 280