Pairwise Alignments

Query, 280 a.a., Small-conductance mechanosensitive channel from Pseudomonas fluorescens FW300-N2E2

Subject, 286 a.a., mechanosensitive channel (NCBI) from Escherichia coli BW25113

 Score =  186 bits (473), Expect = 4e-52
 Identities = 99/286 (34%), Positives = 170/286 (59%), Gaps = 10/286 (3%)

Query: 2   DLNAEVDNLVKASQTWI----PMIMEYGSRVLLAVITLAIGWWLINKVTQKLGALLALRN 57
           DLN  VD+ +  + +W+     +++ Y   ++ A+  + +G  +   ++  +  L+  R 
Sbjct: 3   DLNV-VDS-INGAGSWLVANQALLLSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRK 60

Query: 58  ADLALQGFISTLANIILKILLIVSVASMIGVETTSFVAAIGAAGLAIGLALQGSLANFAG 117
            D  +  F+S L    +    +++    +GV+T S +A +GAAGLA+GLALQGSL+N A 
Sbjct: 61  IDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAA 120

Query: 118 GVLILLFRPFRIGDWIEAQGVAGTVDSIQIFHTVLRTGDNKTVIVPNGNLSNGIITNTNR 177
           GVL+++FRPFR G++++  GVAGTV S+QIF T +RT D K +++PNG +  G I N +R
Sbjct: 121 GVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSR 180

Query: 178 QPTRKVVFDVGVDYQADLQKAREVLLDLAKDE-RVLADPAPEAVISTLGDSSITVSLRIW 236
           +P R+  F +GV Y +D+ + +++L ++ + E R+L D      ++ LG SSI   +R+W
Sbjct: 181 EPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVW 240

Query: 237 VKTADYWSVMFMLNEQARDRLKDAGIDIPFPQRVI---RVVQEGAA 279
             + D  +V + + E+ +     AGI  P+PQ  +   RV ++ AA
Sbjct: 241 SNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVKEDKAA 286