Pairwise Alignments

Query, 441 a.a., Nitrogen regulation protein NR(I) from Pseudomonas fluorescens FW300-N2E2

Subject, 454 a.a., sigma-54 dependent transcriptional regulator from Variovorax sp. OAS795

 Score =  421 bits (1083), Expect = e-122
 Identities = 222/444 (50%), Positives = 303/444 (68%), Gaps = 8/444 (1%)

Query: 5   VMVVDDEGSIRSAVEQWLSLSGFQVQLFARADECLARLPEHFPGVILSDVRMPGLSGLEL 64
           V++V+D+  +R +  Q L+L+GF+V+ F  A+   A +    P +++ DVR+PGLSG E 
Sbjct: 9   VLLVEDDEDVRLSTTQVLTLAGFEVEAFNSAERARAHISFGVPAIVVCDVRLPGLSGAEW 68

Query: 65  LAEVRRRDPDLPVILLTGHGDVPMAVEAMRDGAYDFLEKPFSPEALLGSLRRALDKRTLV 124
           L E+   D +LPVIL+TGHG + MAV+AMR+GAYDF+EKPF  E L+  +R A+++R L 
Sbjct: 69  LCELHATDAELPVILVTGHGHIAMAVQAMREGAYDFIEKPFGSERLVAIVRHAVERRQLS 128

Query: 125 LENRRLHEQADARARLDGTLLGVSRALQNLRRQVLDLAALPVNVLIRGETGSGKELVARC 184
           L+ R L +  +    +   L+G S  +Q +RR V+ LA    +VLI GETG+GKELVARC
Sbjct: 129 LQVRALRDALENWNGIQSVLIGRSAQMQQVRRTVMTLAETSADVLIYGETGTGKELVARC 188

Query: 185 LHDFGTRASMPFVALNCAAIPEALFEAELFGHESGAFTGAQGKRIGKLEYANGGTLFLDE 244
           LH+   R    FV LNC  +PEAL E+ELFGHE+GAFT A   R+GK EYA+GGTLFLDE
Sbjct: 189 LHEHSERRRQHFVPLNCGGLPEALAESELFGHEAGAFTSANRVRVGKFEYAHGGTLFLDE 248

Query: 245 IESMPLAQQVKLLRVLQEQKLERLGSNQSIQVDLRIIAATKPDLLDEARAGRFREDLAYR 304
           IESMP+A Q+KLLR LQE+ +ER+GSN++I  D R++AA+K DL + +   +FR DL YR
Sbjct: 249 IESMPMAVQIKLLRALQERSIERIGSNKAIAFDCRVVAASKDDLKEMSDKQKFRADLYYR 308

Query: 305 LNIAELRLPPLRERREDIPLLFEHFTHSAAERLGRAAAPLSGPQLSHLLSHDWPGNVREL 364
           L +A + LPPLRERREDIPLLFEHF+  AA R  RAA  L+G Q++ L+++ WPGNVREL
Sbjct: 309 LGVAFIELPPLRERREDIPLLFEHFSLLAAARYERAAPILTGAQVADLMAYAWPGNVREL 368

Query: 365 ANVAERQVLGL---DQPQALETEPG-----QSLAAQQEAFEAQCLRAALTRHKGDVKAVL 416
            NVA+R  LGL      QA  +  G     +SL  Q EAFE   +  AL +H+GD  A  
Sbjct: 369 RNVADRFALGLLGERLTQARGSAEGMPALPRSLPQQVEAFERAVIVEALRKHQGDQPATA 428

Query: 417 EELQLPRRTFNEKMQRHGLSREMF 440
             L + R+T ++K+++ G++ E F
Sbjct: 429 SALSIARQTLHDKLRKLGIAAEEF 452