Pairwise Alignments

Query, 441 a.a., Nitrogen regulation protein NR(I) from Pseudomonas fluorescens FW300-N2E2

Subject, 441 a.a., sigma-54 dependent transcriptional regulator from Pseudomonas sp. SVBP6

 Score =  443 bits (1139), Expect = e-129
 Identities = 229/434 (52%), Positives = 299/434 (68%), Gaps = 2/434 (0%)

Query: 4   SVMVVDDEGSIRSAVEQWLSLSGFQVQLFARADECLARLPEHFPGVILSDVRMPGLSGLE 63
           +V++V+D+  +    +Q L+L     +    A+E L R+ + F G+++SD+R+PG+ GLE
Sbjct: 7   TVLIVEDDPHVLLGCQQALALEDIACEGVGSAEEALQRIGDDFAGIVVSDIRLPGIDGLE 66

Query: 64  LLAEVRRRDPDLPVILLTGHGDVPMAVEAMRDGAYDFLEKPFSPEALLGSLRRALDKRTL 123
           LL+ ++ RD  LPV+L+TGHGD+ MAV AMR+GAYDF+EKPF+PE L+  +RRAL++R L
Sbjct: 67  LLSRLKARDRSLPVVLITGHGDIDMAVGAMRNGAYDFMEKPFAPERLVEVVRRALEQRGL 126

Query: 124 VLENRRLHEQADARARLDGTLLGVSRALQNLRRQVLDLAALPVNVLIRGETGSGKELVAR 183
             E   L  Q   ++ L+G ++G S A+QNLR  + ++A    NVLI GETG+GKELVAR
Sbjct: 127 SREVFALRRQLAGQSTLEGRIIGRSPAMQNLRELIANVADTSANVLIEGETGTGKELVAR 186

Query: 184 CLHDFGTRASMPFVALNCAAIPEALFEAELFGHESGAFTGAQGKRIGKLEYANGGTLFLD 243
           CLHDF  R   PFVALNC  +PE LFE+E+FGHE+ AFTGA  +RIGK+E+ANGGTLFLD
Sbjct: 187 CLHDFSRRQGAPFVALNCGGLPENLFESEIFGHEANAFTGAGKRRIGKIEHANGGTLFLD 246

Query: 244 EIESMPLAQQVKLLRVLQEQKLERLGSNQSIQVDLRIIAATKPDLLDEARAGRFREDLAY 303
           E+ESMPL  Q+KLLRVLQE+ LERLGSNQSI VD R+IAATK DL     +G+FR DL Y
Sbjct: 247 EVESMPLNLQIKLLRVLQERTLERLGSNQSIAVDCRVIAATKSDLNALGHSGQFRSDLYY 306

Query: 304 RLNIAELRLPPLRERREDIPLLFEHFTHSAAERLGRAAAPLSGPQLSHLLSHDWPGNVRE 363
           RLN+  L LPPLRERREDI  LFEHF   ++ R  R    L    LS L++HDWPGNVRE
Sbjct: 307 RLNVVTLELPPLRERREDILQLFEHFLQQSSLRFDRETPQLDSQTLSRLMAHDWPGNVRE 366

Query: 364 LANVAERQVLGLD--QPQALETEPGQSLAAQQEAFEAQCLRAALTRHKGDVKAVLEELQL 421
           L NVAER  LGL   +        G   A   EAFE   L  AL R  G++    +EL +
Sbjct: 367 LRNVAERYALGLPAFKKAGASANQGLGFAEAVEAFERNLLSDALQRTGGNLSQASQELGM 426

Query: 422 PRRTFNEKMQRHGL 435
            + T  +K++++GL
Sbjct: 427 AKTTLFDKVKKYGL 440