Pairwise Alignments

Query, 288 a.a., ABC spermidine/putrescine transporter, inner membrane subunit from Pseudomonas fluorescens FW300-N2E2

Subject, 287 a.a., Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  134 bits (338), Expect = 2e-36
 Identities = 72/223 (32%), Positives = 131/223 (58%), Gaps = 2/223 (0%)

Query: 49  FSLASYEQLLEPYYLKSLLLTLRLALISAVIAVLLAIPVAYTMSRLASPLLRRVFLAAVL 108
           F+L +Y +LL+P Y + LL +L +ALI+ +  ++L  P A+ +++L   + R + L  ++
Sbjct: 48  FTLDNYARLLDPLYFEVLLHSLNMALIATLSCLVLGYPFAWFLAKLPEKI-RPLLLFLLI 106

Query: 109 LPLLVNLLLQSYGWLVILGPAGMLNQALMGLGLIKRPIMLLYNQNGVLMGLVQTAFPLAV 168
           +P   N L++ YG  + L   G LN+ L+ LG+I  PI +++  + V++GLV    P  V
Sbjct: 107 VPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGVIDTPIRIMFTPSAVIIGLVYILLPFMV 166

Query: 169 LPIASAMRGVARSYEEAAATLGASRFQVFRQVVLPMSLPGIITGATLVFAYNASSFVVPL 228
           +P+ S++  + +   EAA  LGAS+ Q F ++++P+++PGI+ G  LV       F V  
Sbjct: 167 MPLYSSIEKLDKPLLEAARDLGASKMQTFIRIIIPLTMPGIVAGCLLVMLPAMGLFYVSD 226

Query: 229 LLGGRRVPMLAVMVHDQIAPLMNWPAASAAGVVL-IVTTLMIM 270
           L+GG +  ++  ++  Q   + +WP  +A  + L IV  LM++
Sbjct: 227 LMGGAKNLLIGNVIKVQFLNIRDWPFGAATSITLTIVMGLMLL 269