Pairwise Alignments

Query, 288 a.a., ABC spermidine/putrescine transporter, inner membrane subunit from Pseudomonas fluorescens FW300-N2E2

Subject, 275 a.a., spermidine/putrescine ABC transporter permease from Agrobacterium fabrum C58

 Score =  142 bits (358), Expect = 8e-39
 Identities = 82/266 (30%), Positives = 152/266 (57%), Gaps = 6/266 (2%)

Query: 19  PSMLFLGVLIAASLLVLRMSVGTKGAEWSGFSLASYEQLL-EPYYLKSLLLTLRLALISA 77
           P+ +F   +    + +L +S G +  +  G++L++Y     +P      L TL+L  +  
Sbjct: 14  PAAIFAAAVFLVPVFML-LSEGFRTTD--GWTLSAYAAFFSDPLNQTVFLRTLKLGALVT 70

Query: 78  VIAVLLAIPVAYTMSRLASPLLRRVFLAAVLLPLLVNLLLQSYGWLVILGPAGMLNQALM 137
           V++ ++    A+ +  L SP  +   +  V+LPL+++ + ++Y W+VILG  G++NQAL 
Sbjct: 71  VVSAVVGYAAAFAIINL-SPGKKGHVVNLVVLPLMISPVARTYAWIVILGRTGIVNQALQ 129

Query: 138 GLGLIKRPIMLLYNQNGVLMGLVQTAFPLAVLPIASAMRGVARSYEEAAATLGASRFQVF 197
            +GL   PI +L+++  V +GL+Q   PL ++ + SA+  + +    AA  LGA+ FQVF
Sbjct: 130 AVGLSDAPIRILFSETAVFIGLLQLFLPLMIISLISALENMPKDTIAAARVLGANWFQVF 189

Query: 198 RQVVLPMSLPGIITGATLVFAYNASSFVVPLLLGGRRVPMLAVMVHDQIAPLMNWPAASA 257
            +V+LP++  G++ G TLVF  + ++++ P +LGG +V ML  +++ Q+    N+ AAS 
Sbjct: 190 WKVILPLTKEGLVVGGTLVFTGSLTAYITPAILGGSKVLMLETLLYQQVTVSNNFVAASV 249

Query: 258 AGVVLIVTTLMI-MTLSEYFTGRRRR 282
              +LIV +    + L    T R ++
Sbjct: 250 IAFILIVMSFAANILLKRIATARNKK 275