Pairwise Alignments

Query, 288 a.a., ABC spermidine/putrescine transporter, inner membrane subunit from Pseudomonas fluorescens FW300-N2E2

Subject, 291 a.a., polyamine ABC transporter permease from Agrobacterium fabrum C58

 Score =  151 bits (381), Expect = 2e-41
 Identities = 81/231 (35%), Positives = 134/231 (58%), Gaps = 2/231 (0%)

Query: 49  FSLASYEQLL-EPYYLKSLLLTLRLALISAVIAVLLAIPVAYTMSRLASPLLRRVFLAAV 107
           F L +Y +LL    YLK    T  ++ +  V+++ +  PVA+ ++ + S L   VF A +
Sbjct: 55  FGLGNYAELLGSSTYLKIFFNTFAVSALVTVVSLAIGFPVAWALAIMPSRLASIVF-AIL 113

Query: 108 LLPLLVNLLLQSYGWLVILGPAGMLNQALMGLGLIKRPIMLLYNQNGVLMGLVQTAFPLA 167
           LL +  NLL ++Y W+V+L   G++N+ LMGLG+I +P+ L+ N  GV +G+     P  
Sbjct: 114 LLSMWTNLLARTYAWMVLLQRTGVVNKTLMGLGIIDKPLALVNNLTGVTIGMTYIMLPFI 173

Query: 168 VLPIASAMRGVARSYEEAAATLGASRFQVFRQVVLPMSLPGIITGATLVFAYNASSFVVP 227
           ++P+   +R +  +  +AA+  GASR+Q   +V++P++ PG++ GA +VF  +   FV P
Sbjct: 174 IIPLYGVIRKIDPAILQAASLCGASRWQALTRVLIPLAAPGMMAGALMVFVMSLGYFVTP 233

Query: 228 LLLGGRRVPMLAVMVHDQIAPLMNWPAASAAGVVLIVTTLMIMTLSEYFTG 278
            LLGG    MLA ++   +  L+NW    AA  VL+V TL +  +   F G
Sbjct: 234 ALLGGTANMMLAELIAQFVQSLVNWGMGGAAAFVLLVVTLALYAVQLKFFG 284