Pairwise Alignments

Query, 840 a.a., CFA/I fimbrial subunit C precursor from Pseudomonas fluorescens FW300-N2E2

Subject, 894 a.a., colonisation factor antigen c, usher from Escherichia coli ECOR27

 Score = 84.7 bits (208), Expect = 2e-20
 Identities = 211/889 (23%), Positives = 340/889 (38%), Gaps = 109/889 (12%)

Query: 11  LALLLCASALAAPTAPGTTPRSLLSQAKGLPEEFEAHFFDVPLA---VRVELDQQYLGEA 67
           LALL+ AS   A       P      A+G  E  E +F    L      V LD       
Sbjct: 6   LALLILASLSPAEATLTKIPAGFEVIAQGQQEYIEVYFSGKSLGKYYAMVNLD------T 59

Query: 68  MVVLTRDDRITLLEFTDTQDSPVSAVDRGQWEQLLKEGRPLGACETRCTSGL-------L 120
           +  L        LE  D  D  ++ + + +  Q L     L     R  SG        L
Sbjct: 60  VTFLDPASLYNKLEL-DVDDQKIAHIVKEKLSQPLARHGELACGYVRTDSGCGFLNTDTL 118

Query: 121 AVHYSLEHSLVSILTQNVERGGAE-KRFYDQPEEGSLGLIFNNQ-LNLNGGQEQDT---- 174
            + Y+ E S  ++          + K  Y  P++ ++    + Q +N+    +  +    
Sbjct: 119 EIIYNDEESSATLFINPQWNSAFDAKSLYLNPDKNTVNAFIHQQDINVLAQDDYQSLSIQ 178

Query: 175 -GGRYGLNASSSLG-NWT-QSFDLQLSRLGGPDDKLYHAVHELFTQREMEDSFFRLGYFM 231
             G  G+  +S +G +W    +D         D      V +L+ + +    ++     M
Sbjct: 179 GNGALGITENSYIGAHWNFNGYDADDVSDSNAD------VSDLYYRYDFLRRYYVQAGRM 232

Query: 232 PGSDGLNRQIRSFGAN--PDTAV-GVMYGSSDSLVINNPKPSVYPIYVTASRQAAVEIYR 288
                 N Q  +F  N  P  A+ G+  GS+ S +         P+ V  SR + V+ YR
Sbjct: 233 DNRTLFNAQGGNFTFNFLPLGAIDGMRIGSTLSYLNQAQSQQGTPVMVLLSRNSRVDAYR 292

Query: 289 NGLLINTQAVSAGLQSLDTRPLPGGIYEVEVRLIEDGQTTATTQELVYKPNNWRSADDRW 348
           N  L+ +  +++G Q +DT   P G Y V +++ E+ Q T T  ELV         D   
Sbjct: 293 NEQLLGSFYLNSGSQFIDTSSFPPGSYSVALKVYENNQLTRT--ELVPFTKTGGLTDGNA 350

Query: 349 RYNLFAGRESKLLSNWDDQPSGFMTAGVGLNYLLHPRVVLGLSTRQVQDKLQYGTSVDWT 408
           ++ L AG+ +  +S  DD+ S +    +G+   LHP+  L        D   +    +WT
Sbjct: 351 QWFLQAGKTTSQVS--DDESSAYQ---LGVRLPLHPQYELYAGLANADDVSAFELGNNWT 405

Query: 409 L----ANNTSFFANVYQTEQYGTGMDLQALYS------YGLGSVVASHNRSWLDTRNTYE 458
                  N +  A+V++ +  G G   QA +S       G     +  +    D+R +Y 
Sbjct: 406 ADLGGVGNLAISASVFRNDDGGKGDMQQANWSNPGWPTLGFYRTNSDGDACTTDSRESYN 465

Query: 459 VLP--DGTRVRQRNVFVGQTSNSSLAVNHRLSNKSSVNGRLFYSEGNVEGAGLDLGWTQR 516
            L   +         FVG             ++ S    +    E N          ++ 
Sbjct: 466 ALSCYESISATVSQNFVGWNMMLGYTRTQNNTDDSLRWDKQQSFENNYLRQTTAQSISET 525

Query: 517 GKLGSSDA----NWRLS----VFDRPGTSSTADRRNRGLDLSVSVALGGPGEYWSGSIGT 568
            +L +S A    +W LS    VF R    +  D  + GL LS S++     +  + S  T
Sbjct: 526 VQLSASRAFVMRDWILSTSVGVFHR--NDNGGDNDDNGLYLSFSLSDTPTMDSNNNSHST 583

Query: 569 RTS-------RDGDRDN-NASLTYRRDLQDHVLQSVSATAL-TDTYGMGLSGLASFETDS 619
             S       +DGD+ +   S T+  D   H    V+   L TDT    ++G      D 
Sbjct: 584 NVSTDYRYSEQDGDQTSWQLSHTFYNDSFSHKELGVTVGGLNTDTINSAVNG----RWDG 639

Query: 620 LYGDGFVQRS-SYNGNLTGGLN-----LSSTVAVG--GRKVAFTGLPQNGGAGMIVDV-- 669
            YG+ +   S SY+      L+      SST+AV   G  +  +G     GA ++VDV  
Sbjct: 640 QYGNVYATVSDSYDRKNHDHLSAFTGTYSSTLAVSRYGVNLGASGTDDLLGA-VLVDVKG 698

Query: 670 --ETDLDDIVLLADDLTGGTTTLRPGRN---FVPITAYQNSLVTFD--FDGLHPPAANI- 721
             E D D   L  +    G+ TL+ G++     P   +Q+  V  +    G      NI 
Sbjct: 699 FSEQDEDSQDLQLEARVAGSRTLQLGQSDSVLFPYPGFQSGFVEVNDSSQGNQQGTTNII 758

Query: 722 -QPARTRYHLNKGGVDYRKVSVMRSVTVLGRLL---DGQGQPLKGHHVINHASRGVSEVD 777
                    L  G + YR+VS   +   +GRLL     +  P+ G   +N A   V+E D
Sbjct: 759 NGAGNRELMLLPGKLRYREVSASFNYNYIGRLLLPAAVKKFPIVG---LNSAMLLVAE-D 814

Query: 778 GFFSMEMNASSPTLEVRYGNDLL-CQFRLDPDNASSEGDVLMIGDLRCT 825
           G F++E+N S   L +  G   L C   +    AS    +   GD+ C+
Sbjct: 815 GGFTLEINGSEKELYLLSGQQFLKCPLSVVKKRAS----IRYSGDVTCS 859