Pairwise Alignments

Query, 254 a.a., ABC transporter for D-Alanine, ATPase component (from data) from Pseudomonas fluorescens FW300-N2E2

Subject, 252 a.a., Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ from Escherichia coli ECRC99

 Score =  422 bits (1084), Expect = e-123
 Identities = 199/254 (78%), Positives = 233/254 (91%), Gaps = 2/254 (0%)

Query: 1   MSEAIKQPVSPEGIIQMQGVNKWYGQFHVLKDINLNVKQGERIVLCGPSGSGKSTTIRCL 60
           MS+ + QP +   +I ++ VNKWYGQFHVLK+INL V+ GERIVLCGPSGSGKSTTIRC+
Sbjct: 1   MSQILLQPAN--AMITLENVNKWYGQFHVLKNINLTVQPGERIVLCGPSGSGKSTTIRCI 58

Query: 61  NRLEEHQQGRIVVDGVELTNDLKQIEAIRREVGMVFQHFNLFPHLTILQNCTLAPMWVRK 120
           N LEEHQQGRIVVDG+EL  D++ IE +R+EVGMVFQHFNLFPHLT+LQNCTLAP+WVRK
Sbjct: 59  NHLEEHQQGRIVVDGIELNEDIRNIERVRQEVGMVFQHFNLFPHLTVLQNCTLAPIWVRK 118

Query: 121 MPKRKAEEIAMHYLERVRIPEQAHKYPGQLSGGQQQRVAIARALCMKPKIMLFDEPTSAL 180
           MPK++AE +AMHYLERVRI E AHK+PGQ+SGGQQQRVAIAR+LCMKPKIMLFDEPTSAL
Sbjct: 119 MPKKEAEALAMHYLERVRIAEHAHKFPGQISGGQQQRVAIARSLCMKPKIMLFDEPTSAL 178

Query: 181 DPEMVKEVLDTMIGLAEDGMTMLCVTHEMGFARTVANRVIFMDKGEIVEQAAPNDFFDNP 240
           DPEMVKEVLDTMIGLA+ GMTMLCVTHEMGFARTVA+RVIFMD+GEIVEQAAP++FF +P
Sbjct: 179 DPEMVKEVLDTMIGLAQSGMTMLCVTHEMGFARTVADRVIFMDRGEIVEQAAPDEFFAHP 238

Query: 241 QNDRTKLFLSQILH 254
           +++RT+ FLSQ++H
Sbjct: 239 KSERTRAFLSQVIH 252