Pairwise Alignments

Query, 375 a.a., ABC transporter for D-Alanine, permease component 2 (from data) from Pseudomonas fluorescens FW300-N2E2

Subject, 392 a.a., amino acid ABC transporter permease from Pseudomonas sp. SVBP6

 Score =  659 bits (1701), Expect = 0.0
 Identities = 328/375 (87%), Positives = 353/375 (94%)

Query: 1   VRAWVFQVVTVVAVIALGWFLFDNTQTNLQHRGITSGFGFLERSAGFGIAQHLIDYTEAD 60
           VRAW+FQ++TVVAV+ LGW+LF NTQTNLQHRGITSGF FLERSAGFGIAQHLI YTE D
Sbjct: 18  VRAWLFQILTVVAVVGLGWYLFHNTQTNLQHRGITSGFDFLERSAGFGIAQHLISYTEQD 77

Query: 61  SYARVFLIGLLNTLLVTFIGVILATILGFIIGVARLSQNWIISKLATVYVEVFRNIPPLL 120
           SYARVF+IGLLNTLLVTFIG+ILAT+LGFIIGVARLS NW+ISKLATVYVE FRNIPPLL
Sbjct: 78  SYARVFVIGLLNTLLVTFIGIILATLLGFIIGVARLSPNWMISKLATVYVETFRNIPPLL 137

Query: 121 QILFWYFAVFLSMPGPRAAHNFGDTFFVSSRGLNMPAALVAEGFWPFVISVVLAIVAIVL 180
           QILFWYFAVFL++PGPR + N  DTFF+S+RGLNMP A +AEGFWPFV+S+ LAIVAIVL
Sbjct: 138 QILFWYFAVFLTLPGPRGSINLNDTFFISNRGLNMPGASMAEGFWPFVVSLALAIVAIVL 197

Query: 181 MTRWANKRFEATGEPFHKFWVGLALFLVIPALSALLFGAPVHWEMPELKGFNFVGGWVLI 240
           M R AN+RFEATGEPFHKFWVGL LF  IPAL  LLFG+P+HW+MP+LKGFNFVGGWVLI
Sbjct: 198 MVRLANRRFEATGEPFHKFWVGLFLFFGIPALGVLLFGSPLHWDMPQLKGFNFVGGWVLI 257

Query: 241 PELLALTLALTVYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRNGPTLRKVIIPQALRVI 300
           PELLALTLALT+YTAAFIAEIVRSGI+SVS+GQTEAARSLGLR GPTLRKVIIPQALRVI
Sbjct: 258 PELLALTLALTIYTAAFIAEIVRSGIRSVSYGQTEAARSLGLREGPTLRKVIIPQALRVI 317

Query: 301 IPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAISISIS 360
           IPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAISISIS
Sbjct: 318 IPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAISISIS 377

Query: 361 LLMNWYNKRIALIER 375
           LLMNWYNKRIALIER
Sbjct: 378 LLMNWYNKRIALIER 392