Pairwise Alignments

Query, 375 a.a., ABC transporter for D-Alanine, permease component 2 (from data) from Pseudomonas fluorescens FW300-N2E2

Subject, 392 a.a., amino acid ABC transporter permease from Dickeya dadantii 3937

 Score =  468 bits (1205), Expect = e-136
 Identities = 241/376 (64%), Positives = 299/376 (79%), Gaps = 2/376 (0%)

Query: 1   VRAWVFQVVTVVAVIALGWFLFDNTQTNLQHRGITSGFGFLERSAGFGIAQHLIDYTEAD 60
           VRAW++Q++ VV V+    +L  NT TNL  RGITSGF FL  SA FGI QHLIDY + D
Sbjct: 18  VRAWLYQILAVVIVVVTVGYLLHNTVTNLAQRGITSGFAFLNNSADFGIVQHLIDYEQGD 77

Query: 61  SYARVFLIGLLNTLLVTFIGVILATILGFIIGVARLSQNWIISKLATVYVEVFRNIPPLL 120
           +YARVF++GLLNTLLV+ I ++ A++LGFI+G+ARLS NW++ KL+T+Y+E FRNIPPLL
Sbjct: 78  TYARVFVVGLLNTLLVSAICIVCASLLGFIVGLARLSDNWLLRKLSTIYIETFRNIPPLL 137

Query: 121 QILFWYFAVFLSMPGPRAAHNFGDTFFVSSRGLNMPAALVAEGFWPFVISVVLAIVAIVL 180
           QI FWYFAV  ++PGPR A N  DTFF+S+RGL +PAA    G  P ++++++A+V   +
Sbjct: 138 QIFFWYFAVLRNLPGPRQAVNALDTFFLSNRGLYIPAAEFGPGALPSILALIIALVVGAM 197

Query: 181 MTRWANKRFEA-TGEPFHKFWVGLALFLVIPALSALLFGAPVHWEMPELKGFNFVGGWVL 239
           + R  NKR+ A TG+    + + LA+ +V+  LS L+FG  +HW+ P LKGFNF GG VL
Sbjct: 198 IFR-RNKRYHALTGQQRRSWPIPLAVLVVLLGLSHLIFGRALHWDFPVLKGFNFSGGMVL 256

Query: 240 IPELLALTLALTVYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRNGPTLRKVIIPQALRV 299
           IPEL AL LAL+VYT++FIAEI+RSGI+SVS+GQ EAA SLGL    TLRKVI+PQALRV
Sbjct: 257 IPELAALALALSVYTSSFIAEIIRSGIQSVSYGQHEAALSLGLPKPVTLRKVILPQALRV 316

Query: 300 IIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAISISI 359
           IIPPLTSQYLN+ KNSSLAA IGYP+MVSLFAGTVLNQTGQAIE IAITMSVYL IS+ I
Sbjct: 317 IIPPLTSQYLNVVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLLI 376

Query: 360 SLLMNWYNKRIALIER 375
           SLLMN YN++IALIER
Sbjct: 377 SLLMNIYNRKIALIER 392