Pairwise Alignments

Query, 603 a.a., LppC putative lipoprotein from Pseudomonas fluorescens FW300-N2E2

Subject, 678 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

 Score =  180 bits (457), Expect = 2e-49
 Identities = 169/677 (24%), Positives = 282/677 (41%), Gaps = 97/677 (14%)

Query: 6   RLLSALCLAALLAA-----CAS-SPSSSLGELPRTPDASIEQLLEQATQSKNPEKAALLR 59
           RL +A CL  +LAA     C + +P  S   +  T  A     L+Q  QS +  +     
Sbjct: 8   RLKAARCLPVVLAALIFAGCGTHTPDQSTAYMQGTAQADSAFYLQQMQQSSDDTRINWQL 67

Query: 60  LSAADLAYRQGNAGQSAQILQQVPMEQLKPGQQIFASTLSAELAMTRNQPKAALTALGHP 119
           L+   L  ++G  GQ+ ++  Q+P E L   Q+   + L+ E+ + +     A   L   
Sbjct: 68  LAIRALV-KEGKTGQAVELFNQLPQE-LNDAQRREKTLLAVEIKLAQKDFAGAQNLLAK- 124

Query: 120 SLQHLSEMPVEQQVRTGTVRARALEADGQ-TLAAAKERIFIAPLLENDAAAKNHESIWSL 178
               ++   +EQ  +    +A+   + G+ ++   +  I   PLL      +N ++ W  
Sbjct: 125 ----ITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIAQEPLLGAKEKQQNIDATWQA 180

Query: 179 IASLPTDQLQP----SSNDDLGGWLSLAQA-VKTAGTLEQQQAAIDHWREQNPKHPAALQ 233
           ++S+  +Q       +  + L GWL L +         +  +A I  W+++ P +P A  
Sbjct: 181 LSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDPDMMKAGIADWQKRYPNNPGAKM 240

Query: 234 LPIPLVKLKELASQPLSKIALLLPQNG----------------------PLAAVAKALRE 271
           LP  LV +K       +KIALLLP NG                      P+AA   A   
Sbjct: 241 LPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTIQQGFEAAKNIGTQPVAAQVAAAPA 300

Query: 272 GFMAAHYQAQQA---------------GQKPPS------------------------IQF 292
             +A   Q Q                 G++P +                        ++ 
Sbjct: 301 ADVAEQPQPQTVDGVASPAQASVSDLTGEQPAAQPVPVSAPATSTAAVSAPANPSAELKI 360

Query: 293 YDSSSLTSMDEFYRKAQADGVQLVVGPLEKPLVKQISTRPQLPITTLALNYSEGEQGPPQ 352
           YD+SS   + +   + Q DG  +VVGPL K  V+++  +   P+  LALN  E  +    
Sbjct: 361 YDTSS-QPLSQILSQVQQDGASIVVGPLLKNNVEEL-LKSNTPLNVLALNQPENIENRVN 418

Query: 353 LFQFGLAPEDEAREVSRRARADGLHRAAAMVPKGEWGDRVLKAFSQDWQANGGTIIAIER 412
           +  F L+PEDEAR+ +R  R  G      ++P+   GDRV  AF+Q+WQ  GG  +  ++
Sbjct: 419 ICYFALSPEDEARDAARHIRDQGKQAPLVLIPRSSLGDRVANAFAQEWQKLGGGTVLQQK 478

Query: 413 VDQPVQL------AQQIADMFQLRQSEGRAKSLQSTVGTTVAAQPSRRQ------DIEFI 460
                +L         IA             S  +T   T+   P+  Q       ++ +
Sbjct: 479 FGSTSELRAGVNGGSGIALTGSPITLRATTDSGMTTNNPTLQTTPTDDQFTNNGGRVDAV 538

Query: 461 FLASTPQQAQQIKPTLNFQYAGD--VPVYATSSVFSASGDQNQYNDMSGIRFCETPWLLD 518
           ++ +TP +   IKP +  +        +YA+S     +   +   +M G+++ E P L  
Sbjct: 539 YIVATPGEIAFIKPMIAMRNGSQSGATLYASSRSAQGTAGPDFRLEMEGLQYSEIPMLAG 598

Query: 519 ANDPLRKQVTAQWPQAGGSLGRLYAMGVDAYRLAPRLGQLKTLPDSRIEGLSGSLAVSAT 578
            N PL +Q  +       SL R+YAMGVDA+ LA    Q++ +    I G +GSL  +  
Sbjct: 599 GNLPLMQQALSA-VNNDYSLARMYAMGVDAWSLANHFSQMRQVQGFEINGNTGSLTANPD 657

Query: 579 QRVQRQLPWAEFLNGQV 595
             + R L W ++  GQV
Sbjct: 658 CVINRNLSWLQYQQGQV 674