Pairwise Alignments

Query, 304 a.a., Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 315 a.a., cytochrome o ubiquinol oxidase subunit II (NCBI) from Escherichia coli BW25113

 Score =  361 bits (927), Expect = e-104
 Identities = 178/297 (59%), Positives = 223/297 (75%), Gaps = 2/297 (0%)

Query: 6   GTLLLGGCNMTLLDPKGQVGLDERNLIITATLLMLLVVVPVIVMTFLFAWKYRATNTNAT 65
           GT+LL GCN  LLDPKGQ+GL++R+LI+TA  LML+VV+P I+M   FAWKYRA+N +A 
Sbjct: 18  GTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAK 77

Query: 66  YTPKWSHSTKIEVAVWTIPVLIIIALGYITYKSTHALDPYRPLDSDVKPITIEVVSMDWK 125
           Y+P WSHS K+E  VWT+P+LIII L  +T+K+THAL+P +PL  D KPITIEVVSMDWK
Sbjct: 78  YSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWK 137

Query: 126 WLFIYPEQGIATVNKIVFPAHTPINFKVTSDTVMNSFFIPGLGGQIYAMAGMQTKLHLIA 185
           W FIYPEQGIATVN+I FPA+TP+ FKVTS++VMNSFFIP LG QIYAMAGMQT+LHLIA
Sbjct: 138 WFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIA 197

Query: 186 NQNAELDGISANYSGAGFTGMKFKAIAT-TQEDFDAWVNDVKKAPKQL-EKAEYEALSKP 243
           N+    DGISA+YSG GF+GMKFKAIAT  +  FD WV   K++P  + + A +E L+ P
Sbjct: 198 NEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAP 257

Query: 244 SQNNPVELYSSVTPNLFQTIIDKYEGMNPGKPMHHEKNEKEVAHNMEGMDMSSHSAA 300
           S+ N VE +S+V P+LF  +I+K+        M   + E      MEGMDMS   +A
Sbjct: 258 SEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGMEGMDMSHAESA 314