Pairwise Alignments

Query, 671 a.a., Excinuclease ABC subunit B from Pseudomonas fluorescens FW300-N2E2

Subject, 696 a.a., excinuclease ABC subunit UvrB from Ralstonia solanacearum UW163

 Score =  899 bits (2323), Expect = 0.0
 Identities = 462/669 (69%), Positives = 545/669 (81%), Gaps = 9/669 (1%)

Query: 2   SEFQLVTRFQPAGDQPEAIRLMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQIQRPTLV 61
           S FQL   + PAGDQP AIR +VEGI  GL++QTLLGVTGSGKT+++ANVIAQ  RP +V
Sbjct: 22  SPFQLYQPYLPAGDQPGAIRQLVEGIGDGLSYQTLLGVTGSGKTYTMANVIAQAGRPAIV 81

Query: 62  LAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQM 121
            APNKTLAAQLY EF+ FFP NAVEYFVSYYDYYQPEAYVP  D FIEKD+S+N+HIEQM
Sbjct: 82  FAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPEAYVPQRDLFIEKDSSVNEHIEQM 141

Query: 122 RLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQYT 181
           RLSATK+LLER+D +IV TVS IYG+G+P  Y +M+L +  GD++ QR ++ RL  +QYT
Sbjct: 142 RLSATKSLLERRDVVIVATVSAIYGIGNPTEYHQMILTLRTGDRISQREVIARLIAMQYT 201

Query: 182 RNDMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESLSAFDPLTGEVIRKLPRFT 241
           RN+ DF R TFRVRGD IDI+PAE    A+R+ELFDDEV+SL  FDPLTG V +K+PRFT
Sbjct: 202 RNETDFQRGTFRVRGDTIDIFPAEHAEMAVRLELFDDEVDSLQLFDPLTGRVRQKIPRFT 261

Query: 242 FYPKSHYVTPRETLLDAIEGIKVELQERLEYLRSNNKLVEAQRLEQRTRFDLEMILELGY 301
            YP SHYVTPRET+L AIE IK EL+ERL++    NKLVEAQRLEQRTRFDLEM+ ELG+
Sbjct: 262 VYPSSHYVTPRETVLRAIEAIKAELRERLDFFYKENKLVEAQRLEQRTRFDLEMLQELGF 321

Query: 302 CNGIENYSRYLSGRPAGAPPPTLYDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETLV 361
           C GIENYSR+LSG   G PPPTL DYLP DAL+ +DESHV + Q   MY GDR+RKETL 
Sbjct: 322 CKGIENYSRHLSGAQPGEPPPTLVDYLPPDALMFLDESHVLIGQFNGMYNGDRARKETLS 381

Query: 362 EYGFRLPSALDNRPMRFDEWESVSPQTIFVSATPGNYEAEHAG-RVVEQVVRPTGLVDPQ 420
           EYGFRLPSALDNRP++F E+E    Q +FVSATP +YE + AG  VVEQVVRPTGLVDP 
Sbjct: 382 EYGFRLPSALDNRPLKFAEFEGKMRQVVFVSATPADYEKQRAGDEVVEQVVRPTGLVDPI 441

Query: 421 VEVRPALTQVDDLLSEISKRVALEERVLVTTLTKRMAEDLTDYLADHGVRVRYLHSDIDT 480
           + VRPA TQVDDLLSEI +RV   ERVLVTTLTKRMAE LT++L++HGV+VRYLHSDIDT
Sbjct: 442 IHVRPATTQVDDLLSEIHERVKAGERVLVTTLTKRMAEQLTEFLSEHGVKVRYLHSDIDT 501

Query: 481 VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA 540
           VERVEIIRDLRLGTFDVLVGINLLREGLD+PEVSLVAILDADKEGFLR+ERSLIQTIGRA
Sbjct: 502 VERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGRA 561

Query: 541 ARNLNGRAILYADRITGSMERAIGETERRRDKQIAFNLANGITPKGVFKDVADIMEGA-T 599
           ARN+NG AILYADRIT SM RAIGETERRR KQIA N A+GITP+GV K + DI++G   
Sbjct: 562 ARNVNGTAILYADRITDSMRRAIGETERRRAKQIAHNEAHGITPRGVVKRIKDIIDGVYN 621

Query: 600 VPGSRSKKRKGMAKAAEESARYEAELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQLRD 659
           V  +R++      KAA+E+ARYE    S  ++ K I++LE++M   A++LEFE AA +RD
Sbjct: 622 VDDARAE-----LKAAQEAARYED--MSEKQVGKEIKRLEKQMLDHAKNLEFEKAAAVRD 674

Query: 660 EIGKLRERL 668
           ++ KL+ ++
Sbjct: 675 QLAKLKSQV 683