Pairwise Alignments

Query, 671 a.a., Excinuclease ABC subunit B from Pseudomonas fluorescens FW300-N2E2

Subject, 697 a.a., excinuclease ABC subunit UvrB from Paraburkholderia sabiae LMG 24235

 Score =  882 bits (2280), Expect = 0.0
 Identities = 439/667 (65%), Positives = 541/667 (81%), Gaps = 6/667 (0%)

Query: 2   SEFQLVTRFQPAGDQPEAIRLMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQIQRPTLV 61
           S F+L   + PAGDQP AI  +VEG+E GL+ QTLLGVTGSGKT+++AN IA++ RP +V
Sbjct: 24  SPFRLYQPYPPAGDQPTAIETLVEGVEDGLSFQTLLGVTGSGKTYTMANTIARLGRPAIV 83

Query: 62  LAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQM 121
            APNKTLAAQLY EF+ FFP NAVEYFVSYYDYYQPEAYVP  D FIEKD+SIN+HIEQM
Sbjct: 84  FAPNKTLAAQLYAEFREFFPRNAVEYFVSYYDYYQPEAYVPQRDLFIEKDSSINEHIEQM 143

Query: 122 RLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQYT 181
           RLSATK+L+ER+D +IV TVS IYG+G+P  Y +M+L +  GDKL QR ++ RL  +QY 
Sbjct: 144 RLSATKSLMERRDVVIVATVSAIYGIGNPSEYHQMILTLRTGDKLGQRDVIARLIAMQYN 203

Query: 182 RNDMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESLSAFDPLTGEVIRKLPRFT 241
           RN+ DF R +FRVRGD IDI+PAE    A+R+ELFDDE+++L  FDPLTG V +K+PRFT
Sbjct: 204 RNEADFQRGSFRVRGDTIDIFPAEHAEMAVRVELFDDEIDTLQLFDPLTGRVRQKIPRFT 263

Query: 242 FYPKSHYVTPRETLLDAIEGIKVELQERLEYLRSNNKLVEAQRLEQRTRFDLEMILELGY 301
            YP SHYVTPRET++ A+E IK EL++RLE+  ++ KLVEAQRLEQRTRFDLEM+ ELG+
Sbjct: 264 VYPSSHYVTPRETVMRAVETIKSELRDRLEFFYNDGKLVEAQRLEQRTRFDLEMLQELGF 323

Query: 302 CNGIENYSRYLSGRPAGAPPPTLYDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETLV 361
           C GIENYSR+ SG   G PPPTL DYLP DA++ +DESHV + Q+  MY GDR+RKE LV
Sbjct: 324 CKGIENYSRHFSGAAPGEPPPTLVDYLPTDAMMFLDESHVLIGQLNGMYNGDRARKENLV 383

Query: 362 EYGFRLPSALDNRPMRFDEWESVSPQTIFVSATPGNYEAEHAGRVVEQVVRPTGLVDPQV 421
           +YGFRLPSALDNRP++F+E+E    Q +FVSATP +YE + AG+V EQVVRPTGLVDP++
Sbjct: 384 DYGFRLPSALDNRPLKFNEFERKMRQVVFVSATPADYEKKTAGQVAEQVVRPTGLVDPEI 443

Query: 422 EVRPALTQVDDLLSEISKRVALEERVLVTTLTKRMAEDLTDYLADHGVRVRYLHSDIDTV 481
            VRPA TQVDD+L+EI++RVA  +RVLVT LTKRMAE LT++LADHGV+VRYLHSDIDTV
Sbjct: 444 AVRPARTQVDDVLAEINERVAAGDRVLVTVLTKRMAEQLTEFLADHGVKVRYLHSDIDTV 503

Query: 482 ERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAA 541
           ERVEIIRDLRLGTFDVLVGINLLREGLD+PEVSLVAILDADKEGFLR+ERSLIQTIGRAA
Sbjct: 504 ERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGRAA 563

Query: 542 RNLNGRAILYADRITGSMERAIGETERRRDKQIAFNLANGITPKGVFKDVADIMEGATVP 601
           RN+NG+AILYAD+IT SM+RAI ETERRR KQ+AFN   GI P+GV K + DI++G    
Sbjct: 564 RNVNGKAILYADKITDSMKRAIDETERRRAKQMAFNEERGIVPRGVVKRIKDIIDGV--- 620

Query: 602 GSRSKKRKGMAKAAEESARYEAELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQLRDEI 661
                  +  A+  E+  R + E  S  ++ K +++LE++M + A++LEFE AAQ+RD++
Sbjct: 621 ---YNVDEARAELKEQQVRAKFEDMSEKQLAKELKRLEKQMMEHAKNLEFEKAAQMRDQL 677

Query: 662 GKLRERL 668
             LR+R+
Sbjct: 678 ALLRQRV 684