Pairwise Alignments

Query, 671 a.a., Excinuclease ABC subunit B from Pseudomonas fluorescens FW300-N2E2

Subject, 702 a.a., excinuclease ABC subunit UvrB from Magnetospirillum magneticum AMB-1

 Score =  795 bits (2053), Expect = 0.0
 Identities = 397/663 (59%), Positives = 508/663 (76%), Gaps = 11/663 (1%)

Query: 3   EFQLVTRFQPAGDQPEAIRLMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQIQRPTLVL 62
           EF++V+ +QPAGDQP+AI  +  G++A    Q LLGVTGSGKTF++A+VIA+ +RP LVL
Sbjct: 21  EFKIVSDYQPAGDQPQAIAELSAGVDADERDQVLLGVTGSGKTFTMAHVIARTRRPALVL 80

Query: 63  APNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQMR 122
           APNKTLAAQLY E K FFP+NAVEYFVSYYDYYQPEAY+P +DT+IEKD+++N+ I++MR
Sbjct: 81  APNKTLAAQLYAEMKGFFPDNAVEYFVSYYDYYQPEAYIPRTDTYIEKDSAVNEQIDRMR 140

Query: 123 LSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQYTR 182
            +AT+ALLER+D I+V +VSCIYG+GS E+Y +M + +  G+ +D+  LL+RL +LQYTR
Sbjct: 141 HAATRALLERRDVILVASVSCIYGIGSVESYARMTVALKVGESIDRSDLLKRLVELQYTR 200

Query: 183 NDMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESLSAFDPLTGEVIRKLPRFTF 242
           ND  F R TFRVRGD ++I+P   +  A R+ LF DE+E+++ FDPLTGE    L   T 
Sbjct: 201 NDAAFERGTFRVRGDAVEIFPVHYEDRAWRLSLFGDEIEAINEFDPLTGEKTCSLSEVTV 260

Query: 243 YPKSHYVTPRETLLDAIEGIKVELQERLEYLRSNNKLVEAQRLEQRTRFDLEMILELGYC 302
           YP SHYVTPR T+  AI+GIK EL+E LE   +  KL+EAQRLEQRT FDLEM+   G+C
Sbjct: 261 YPSSHYVTPRPTITQAIKGIKAELKETLERFHAEGKLLEAQRLEQRTNFDLEMLETTGHC 320

Query: 303 NGIENYSRYLSGRPAGAPPPTLYDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETLVE 362
             IENYSRYL+GR  G PPPTL++YLP DALL++DESHV+VPQ+G MY+GD +RK  L E
Sbjct: 321 KSIENYSRYLTGRRPGDPPPTLFEYLPEDALLIVDESHVTVPQIGGMYRGDFNRKSVLAE 380

Query: 363 YGFRLPSALDNRPMRFDEWESVSPQTIFVSATPGNYEAEHAGRV-VEQVVRPTGLVDPQV 421
           +GFRLPS +DNRP++F+EWE + PQT++VSATPG +E E  G V  EQV+RPTGL+DP  
Sbjct: 381 FGFRLPSCIDNRPLKFEEWELMRPQTVYVSATPGPWEMERTGGVFTEQVIRPTGLIDPVC 440

Query: 422 EVRPALTQVDDLLSEISKRVALEERVLVTTLTKRMAEDLTDYLADHGVRVRYLHSDIDTV 481
            VRP   QVDDLL E+ +   L  R LVTTLTKRMAEDLT+Y+ D+GVRVRYLHSDIDT+
Sbjct: 441 IVRPVEHQVDDLLGEVRQMARLGNRTLVTTLTKRMAEDLTEYMHDNGVRVRYLHSDIDTL 500

Query: 482 ERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAA 541
           ER+EIIRDLRLG FDVL+GINLLREGLD+PE +LVAILDADKEGFLRS+ SLIQTIGRAA
Sbjct: 501 ERIEIIRDLRLGAFDVLIGINLLREGLDIPECALVAILDADKEGFLRSKTSLIQTIGRAA 560

Query: 542 RNLNGRAILYADRITGSMERAIGETERRRDKQIAFNLANGITPKGVFKDVADIMEGATVP 601
           RN++GR ILYAD++T S++ A+ ET RRR+KQ A+N  +GITP+G+ K V+D+M+ +   
Sbjct: 561 RNIDGRVILYADKMTASLDYALAETNRRREKQQAYNALHGITPEGIRKAVSDVMD-SVYE 619

Query: 602 GSRSKKRKGMAKAAEESARYEAELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQLRDEI 661
                   G +  A       A +++          +E++M   A DLEFE AA+LRDE+
Sbjct: 620 ADYVTVGTGDSGLAHGVGHNLASVKA---------DIEKRMKAAAADLEFEEAARLRDEL 670

Query: 662 GKL 664
            +L
Sbjct: 671 RRL 673