Pairwise Alignments

Query, 671 a.a., Excinuclease ABC subunit B from Pseudomonas fluorescens FW300-N2E2

Subject, 749 a.a., excinuclease ABC subunit B from Caulobacter crescentus NA1000 Δfur

 Score =  798 bits (2062), Expect = 0.0
 Identities = 408/668 (61%), Positives = 506/668 (75%), Gaps = 12/668 (1%)

Query: 3   EFQLVTRFQPAGDQPEAIRLMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQIQRPTLVL 62
           +F+LV+ +QPAGDQP AI  +VEG++ G   Q LLGVTGSGKTF++A VIA+ QRP L+L
Sbjct: 46  KFKLVSDYQPAGDQPTAIAELVEGLQNGDQDQVLLGVTGSGKTFTMAQVIARTQRPALIL 105

Query: 63  APNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQMR 122
           APNKTLAAQLY E K+FFP NAVEYFVSYYDYYQPEAYVP +DT+IEKD+SIN+ I++MR
Sbjct: 106 APNKTLAAQLYSEMKSFFPENAVEYFVSYYDYYQPEAYVPRTDTYIEKDSSINEQIDRMR 165

Query: 123 LSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQYTR 182
            SAT+A+LER D I+V +VSCIYG+GS ETY  M   ++ G ++D++ L+  L   QY R
Sbjct: 166 HSATRAILERDDVIVVASVSCIYGIGSVETYTAMTFTLEVGQRVDEKQLIADLVAQQYKR 225

Query: 183 NDMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESLSAFDPLTGEVIRKLPRFTF 242
           ND  F R TFR RGD I+I+PA  +  A R+ +F DEVE+LS FD LTG+    L     
Sbjct: 226 NDQAFERGTFRRRGDTIEIFPAHYEDRAWRVTMFGDEVEALSEFDTLTGKKTADLEMIKV 285

Query: 243 YPKSHYVTPRETLLDAIEGIKVELQERLEYLRSNNKLVEAQRLEQRTRFDLEMILELGYC 302
           Y  SH+VTPR TL  AI  I+ EL+ERLE+L +N KL+EAQRLEQRT FDLEMI   G C
Sbjct: 286 YANSHHVTPRPTLRQAIIAIRQELKERLEWLTANGKLLEAQRLEQRTTFDLEMIETTGSC 345

Query: 303 NGIENYSRYLSGRPAGAPPPTLYDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETLVE 362
            GIENYSRYLSGR  G PPPT ++Y+P +ALL  DESH +VPQ+GAMYKGDR+RK TL E
Sbjct: 346 AGIENYSRYLSGRKTGEPPPTFFEYIPDNALLFTDESHQTVPQIGAMYKGDRNRKWTLAE 405

Query: 363 YGFRLPSALDNRPMRFDEWESVSPQTIFVSATPGNYEAEHAGRV-VEQVVRPTGLVDPQV 421
           YGFRLPSALDNRP++F+EW+++ PQ++ VSATP N+E E AG V  EQV+RPTGL+DP V
Sbjct: 406 YGFRLPSALDNRPLKFEEWDAMRPQSVHVSATPANWELERAGGVFAEQVIRPTGLIDPPV 465

Query: 422 EVRP----ALTQVDDLLSEISKRVALEERVLVTTLTKRMAEDLTDYLADHGVRVRYLHSD 477
           EVRP      +QVDD++ EI + +    R LVT LTK+MAEDLT+YL + G+RVRY+HSD
Sbjct: 466 EVRPVSKDGASQVDDVVDEIRQTIQKGYRTLVTVLTKKMAEDLTEYLTEQGIRVRYMHSD 525

Query: 478 IDTVERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI 537
           +DT+ER+EIIRDLRLG FDVLVGINLLREGLD+PE  LVAILDADKEGFLRSE SLIQTI
Sbjct: 526 VDTIERIEIIRDLRLGHFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSETSLIQTI 585

Query: 538 GRAARNLNGRAILYADRITGSMERAIGETERRRDKQIAFNLANGITPKGVFKDVADIMEG 597
           GRAARN++G+ ILYADR+TGSMERA+ ET RRR+KQ A+NL +GITP+ V +D+ DI+  
Sbjct: 586 GRAARNVDGKVILYADRVTGSMERAMAETARRREKQHAYNLEHGITPESVKRDIKDILNS 645

Query: 598 ATVPGSRSKKRKGMAKAAEESARYEAELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQL 657
               G R     GM++  +          S       ++ LE KM + A +LEFE AA+L
Sbjct: 646 PYERGDRVLVPMGMSETDDRPF-------SGDNFKAALKDLEAKMREAAANLEFETAARL 698

Query: 658 RDEIGKLR 665
           RDEI +++
Sbjct: 699 RDEIKRMK 706