Pairwise Alignments

Query, 139 a.a., Type IV pilin PilA from Pseudomonas fluorescens FW300-N2E2

Subject, 146 a.a., predicted major pilin subunit (NCBI) from Escherichia coli BW25113

 Score = 47.0 bits (110), Expect = 1e-10
 Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 15/94 (15%)

Query: 1  MNKQSGFTLIELLIVVAIIGILATFALPQYSKYQARAKATAGL---------AEVSALKV 51
          M+KQ GFTLIEL++V+ II IL+   +P Y  Y  +A  T  L          E+ AL+ 
Sbjct: 1  MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEH 60

Query: 52 PFEDVMNQGTNPSLANIGGTSPTSNCTLTASGTA 85
             D  + G+N      G  SPT+   ++A   A
Sbjct: 61 GGLDTCDGGSN------GIPSPTTTRYVSAMSVA 88