Pairwise Alignments

Query, 188 a.a., Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) from Pseudomonas fluorescens FW300-N2E2

Subject, 403 a.a., Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 97.8 bits (242), Expect = 2e-25
 Identities = 68/188 (36%), Positives = 99/188 (52%), Gaps = 22/188 (11%)

Query: 6   PAEPKLILFNKPFDVLTQFSDGEGRATLKDFIDVPGIYPA-----GRLDRDSEGLLLLTN 60
           P  P+++ ++KP   +    D + R T+  F  +P +        GRLD ++EGLLLLTN
Sbjct: 98  PPPPRVLAYHKPAGEVVSHDDPQNRPTV--FRRLPKLMQGKWQSVGRLDLNTEGLLLLTN 155

Query: 61  DGQLQARIADPKHKLAKTYWVQVEGEPNAEQLQRLRDGVALNDGMTLPAEARQLDEPQLW 120
            G+L  R+  P+  L + Y V+V G  + E+ QRL DGV L+DG+   A+   +++    
Sbjct: 156 SGELANRLMHPRFGLQREYAVRVLGALSNEEKQRLLDGVKLDDGV---AQFASIEDGGGE 212

Query: 121 PRNPPVRFRKSVPTSWLELVIREGRNRQVRRMTAAVGLPTLRLVRVRIGDWTL-EGLDQG 179
             N            W  + I EGRNR+VRRM  AVG    RL+R+R G   L  GL +G
Sbjct: 213 GAN-----------CWYRVTIGEGRNREVRRMFEAVGHAVSRLIRIRYGAVMLPRGLKRG 261

Query: 180 QWREVPAR 187
            W E+  R
Sbjct: 262 VWLELDDR 269