Pairwise Alignments

Query, 188 a.a., Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) from Pseudomonas fluorescens FW300-N2E2

Subject, 217 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score =  234 bits (598), Expect = 6e-67
 Identities = 115/184 (62%), Positives = 143/184 (77%), Gaps = 2/184 (1%)

Query: 3   KAPPAEP-KLILFNKPFDVLTQFSDGEGRATLKDFIDVPGIYPAGRLDRDSEGLLLLTND 61
           + P  +P ++ILFNKP+DVL QF+D  GR TLK+FI V G+Y AGRLDRDSEGLL+LTN+
Sbjct: 32  RKPENQPTRVILFNKPYDVLPQFTDEAGRKTLKEFIPVQGVYAAGRLDRDSEGLLVLTNN 91

Query: 62  GQLQARIADPKHKLAKTYWVQVEGEPNAEQLQRLRDGVALNDGMTLPAEARQLDEPQ-LW 120
           G LQAR+  P  +  K Y+VQVEG P  + L+ LR+GV LNDG TLPA A  +DEP  LW
Sbjct: 92  GALQARLTQPGKRTGKIYYVQVEGIPTQDALEALRNGVTLNDGPTLPAGAELVDEPAWLW 151

Query: 121 PRNPPVRFRKSVPTSWLELVIREGRNRQVRRMTAAVGLPTLRLVRVRIGDWTLEGLDQGQ 180
           PRNPP+R RKS+PTSWL++ + EGRNRQVRRMTA VG PTLRL+R  +GD++L+ L  G+
Sbjct: 152 PRNPPIRERKSIPTSWLKITLYEGRNRQVRRMTAHVGFPTLRLIRYAMGDYSLDNLANGE 211

Query: 181 WREV 184
           WREV
Sbjct: 212 WREV 215