Pairwise Alignments

Query, 345 a.a., DNA polymerase III delta subunit (EC 2.7.7.7) from Pseudomonas fluorescens FW300-N2E2

Subject, 343 a.a., DNA polymerase III subunit delta from Dickeya dadantii 3937

 Score =  186 bits (471), Expect = 1e-51
 Identities = 115/340 (33%), Positives = 177/340 (52%), Gaps = 5/340 (1%)

Query: 1   MKLAPAQLGKHLQGALAPVYIISGDDPLLCQEAADAIRSAARQQGFDERQVFAADASFDW 60
           +++ P QL   L   L   Y++ G++PLL QE+ D IR+ ARQQ F E   F  D + DW
Sbjct: 2   IRIYPEQLTAQLHEGLRGCYLLFGNEPLLLQESQDQIRTIARQQDFLEHFSFTLDNNTDW 61

Query: 61  GTLLQAGASMSLFAEKRLLELRLPSGKPGDKGAAALIEYCSRPAEDTVLLISLPKLDGSA 120
             +     ++SLFA ++ L L LP   PG  G   L++  +    D +L++   KL  + 
Sbjct: 62  DAIFSTCQALSLFASRQTLLLILPDAGPGAPGGEQLVKLSTLLHPDILLMVRGNKLTKAQ 121

Query: 121 QKTKWGKALVEGPQTQFVQIWPVDVSQLPSWIRQRLSQAGLSASQDAVELIAARVEGNLL 180
           + + W KAL +  Q  +V     +  QLP W+  R     L     A +LI    EGNLL
Sbjct: 122 ENSSWFKALSQ--QGVYVPCMTPEQEQLPRWVAHRAKNMKLELDDAASQLICYCYEGNLL 179

Query: 181 AAAQEIEKLKLMAEGGQITVETVQAAVADSARFDVFGLTDAILNGEAAHALRMLEGLRGE 240
           A  Q +E+L L+   G++T+  V+ AV D+A F  F   DA+L G++  A  +L+ LR E
Sbjct: 180 ALVQALERLSLLYPDGKLTLPRVEQAVNDAAHFTPFHWLDALLGGKSKRAWHILQQLRLE 239

Query: 241 GVEPPVILWALARELRLLANLSLQYSQGVPLDKAFSQARPPVWDKRKPLMSKALQRYSAS 300
             EP ++L  + REL LL  L  + +   PL     Q +  VW  R+PL+++ALQR S +
Sbjct: 240 ECEPVILLRTVQRELLLLLQLKRRMAT-TPLRTLLDQHK--VWQNRRPLLTQALQRLSLT 296

Query: 301 RWAQLLLEAQRIDAQIKGQAAGSPWMSLSRLSLLMAGQRL 340
           +  Q +    R++  +K       W  L  LS+++ G+ L
Sbjct: 297 QLQQAITLLSRLEITLKQNYGQPVWAELETLSMILCGKAL 336