Pairwise Alignments

Query, 345 a.a., DNA polymerase III delta subunit (EC 2.7.7.7) from Pseudomonas fluorescens FW300-N2E2

Subject, 343 a.a., DNA polymerase III, delta subunit from Escherichia coli BL21

 Score =  189 bits (480), Expect = 9e-53
 Identities = 121/341 (35%), Positives = 175/341 (51%), Gaps = 5/341 (1%)

Query: 1   MKLAPAQLGKHLQGALAPVYIISGDDPLLCQEAADAIRSAARQQGFDERQVFAADASFDW 60
           ++L P QL   L   L   Y++ G+DPLL QE+ DA+R  A  QGF+E   F+ D + DW
Sbjct: 2   IRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAAQGFEEHHTFSIDPNTDW 61

Query: 61  GTLLQAGASMSLFAEKRLLELRLPSGKPGDKGAAALIEYCSRPAEDTVLLISLPKLDGSA 120
             +     +MSLFA ++ L L LP   P       L+       +D +L++   KL  + 
Sbjct: 62  NAIFSLCQAMSLFASRQTLLLLLPENGPNGAINEQLLTLTGLLHDDLLLIVRGNKLSKAQ 121

Query: 121 QKTKWGKALVEGPQTQFVQIWPVDVSQLPSWIRQRLSQAGLSASQDAVELIAARVEGNLL 180
           +   W  AL    ++  V     + +QLP W+  R  Q  L     A +++    EGNLL
Sbjct: 122 ENAAWFTALAN--RSVQVTCQTPEQAQLPRWVAARAKQLNLELDDAANQVLCYCYEGNLL 179

Query: 181 AAAQEIEKLKLMAEGGQITVETVQAAVADSARFDVFGLTDAILNGEAAHALRMLEGLRGE 240
           A AQ +E+L L+   G++T+  V+ AV D+A F  F   DA+L G++  AL +L+ LR E
Sbjct: 180 ALAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLMGKSKRALHILQQLRLE 239

Query: 241 GVEPPVILWALARELRLLANLSLQYSQGVPLDKAFSQARPPVWDKRKPLMSKALQRYSAS 300
           G EP ++L  L REL LL NL  Q S   PL   F + R  VW  R+ +M +AL R S  
Sbjct: 240 GSEPVILLRTLQRELLLLVNLKRQ-SAHTPLRALFDKHR--VWQNRRGMMGEALNRLSQP 296

Query: 301 RWAQLLLEAQRIDAQIKGQAAGSPWMSLSRLSLLMAGQRLA 341
           +  Q +    R +  +K     S W  L  LSLL+  + LA
Sbjct: 297 QLRQAVQLLTRTELTLKQDYGQSVWAELEGLSLLLCHKPLA 337