Pairwise Alignments

Query, 631 a.a., Penicillin-binding protein 2 (PBP-2) from Pseudomonas fluorescens FW300-N2E2

Subject, 633 a.a., penicillin-binding protein 2, transpeptidase involved in peptidoglycan synthesis from Escherichia coli BL21

 Score =  514 bits (1323), Expect = e-150
 Identities = 271/630 (43%), Positives = 393/630 (62%), Gaps = 18/630 (2%)

Query: 8   KDHEKDARLVRGRVVFGAIMVVTLICVLIARLYFLQVIQYEYHSTLSENNRVHVQPIPPT 67
           +D+  ++ L   R +   + ++ L  VLIA LY LQ++++  + T S  NR+ + PI P+
Sbjct: 8   RDYTAESALFVRRALVAFLGILLLTGVLIANLYNLQIVRFTDYQTRSNENRIKLVPIAPS 67

Query: 68  RGLIFDRNGVVVADNRPSFSLSMTRERSGDWQHVLDVIVEVLQLTPEDRAIFEKRMRQGR 127
           RG+I+DRNG+ +A NR  + + M  E+  + Q  LD +  V+ LT +D A F K   +  
Sbjct: 68  RGIIYDRNGIPLALNRTIYQIEMMPEKVDNVQQTLDALRSVVDLTDDDIAAFRKERARSH 127

Query: 128 RPFEPVPILFELTEEQIALIAVNQFRLPGVEVVAQLVRHYPQGPHFAHSVGYMGRINEKE 187
           R F  +P+   LTE Q+A  AVNQ+R PGVEV     R+YP G    H +GY+ +IN+K+
Sbjct: 128 R-FTSIPVKTNLTEVQVARFAVNQYRFPGVEVKGYKRRYYPYGSALTHVIGYVSKINDKD 186

Query: 188 LKTLDP----VNYSGTHHIGKTGIERFYEPELHGQVGYEEVETNARGRVLRVLKRTDPIP 243
           ++ L+      NY+ TH IGK GIER+YE  LHGQ GYEEVE N RGRV+R LK   P  
Sbjct: 187 VERLNNDGKLANYAATHDIGKLGIERYYEDVLHGQTGYEEVEVNNRGRVIRQLKEVPPQA 246

Query: 244 GKDIVLSLDIKLQEAAEAALGGRRGAVVALDPNTGEVLAMVSQPSFDPNLFVTGISFKAY 303
           G DI L+LD+KLQ+  E  L G R AVV  DP TG VLA+VS PS+DPNLFV GIS K Y
Sbjct: 247 GHDIYLTLDLKLQQYIETLLAGSRAAVVVTDPRTGGVLALVSTPSYDPNLFVDGISSKDY 306

Query: 304 AELRDSIDRPLFNRVLRGLYPPGSTIKPAVAIAGLDSGVVTASSRVYDPGYYQLPNYDHK 363
           + L +  + PL NR  +G+YPP ST+KP VA++ L +GV+T ++ ++DPG++QLP  + +
Sbjct: 307 SALLNDPNTPLVNRATQGVYPPASTVKPYVAVSALSAGVITRNTTLFDPGWWQLPGSEKR 366

Query: 364 YRNWNRTGDGYVDLETAIMRSNDTYFYDLAHKLGIDRLSSYMNKFGLGQKVSLDMFEESP 423
           YR+W + G G +++  ++  S DT+FY +A+ +GIDRLS +M KFG G    +D+ EE  
Sbjct: 367 YRDWKKWGHGRLNVTRSLEESADTFFYQVAYDMGIDRLSEWMGKFGYGHYTGIDLAEERS 426

Query: 424 GLMPSREWKRATRRQAWFPGETLILGIGQGYMQATPLQLAQATALVASKGKWYRPHL--- 480
           G MP+REWK+   ++ W+ G+T+ +GIGQGY  ATP+Q+++A  ++ + G    PHL   
Sbjct: 427 GNMPTREWKQKRFKKPWYQGDTIPVGIGQGYWTATPIQMSKALMILINDGIVKVPHLLMS 486

Query: 481 ----AKTIEGQKPVDPDPMPDIILRNPSDWQKVNNGMQQVMHGARGTARKASIGAQYRIA 536
                K +   +P +P P+ DI   +   W+   +GM  V +   GTA K    A Y+IA
Sbjct: 487 TAEDGKQVPWVQPHEP-PVGDI---HSGYWELAKDGMYGVANRPNGTAHKYFASAPYKIA 542

Query: 537 GKSGTAQVVAIKQGEKYDRSKVQERHRDHALFVGFAPADNPKIVVSVMVENGESGSGVAA 596
            KSGTAQV  +K  E Y+  K+ ER RDH L   FAP +NP++ V++++ENG +G  V  
Sbjct: 543 AKSGTAQVFGLKANETYNAHKIAERLRDHKLMTAFAPYNNPQVAVAMILENGGAGPAVGT 602

Query: 597 PVVRQIMDAWLL-DEHGQLKPEYASPITAE 625
            ++RQI+D  +L D +  L  E  +   AE
Sbjct: 603 -LMRQILDHIMLGDNNTDLPAENPAVAAAE 631