Pairwise Alignments

Query, 270 a.a., Inner membrane protein from Pseudomonas fluorescens FW300-N2E2

Subject, 265 a.a., DgsA anti-repressor MtfA from Escherichia coli ECRC100

 Score =  162 bits (409), Expect = 9e-45
 Identities = 95/260 (36%), Positives = 137/260 (52%), Gaps = 11/260 (4%)

Query: 7   WRRQRTLAKHPVPEETWQRVRHQLSFLDGISAAEDQWLREACVLFLHDKHLTALPGVELH 66
           W+ Q +  +  +P   WQ     +  L  ++  E   L      FL  K L  L G EL 
Sbjct: 6   WKVQESAHQTALP---WQEAL-SIPLLTCLTEQEQSKLVTLAERFLQQKRLVPLQGFELD 61

Query: 67  QEQRLLLAAQAQLPLMHLGDLNWYQGFHEIVLYPDDFLSPQRYRDASGIEHEWDGEHSGE 126
             +   +A    LP++ LG L W  GFHE+++YP  F+    + D  G+ H      SG+
Sbjct: 62  SLRSCRIALLFCLPVLELG-LEWLDGFHEVLIYPAPFVVDDEWEDDIGLVHNQRIVQSGQ 120

Query: 127 AWPQGPIILAWDGVMASGGWDGYNLVIHELAHKLDMLNGD-ANGLP--PLHAGMRVSDWA 183
           +W QGPI+L W  +  S    G+NL+IHE+AHKLD  NGD A+G+P  PL     V+ W 
Sbjct: 121 SWQQGPIVLNWLDIQDSFDASGFNLIIHEVAHKLDTRNGDRASGVPFIPLR---EVAGWE 177

Query: 184 DAMQQAFDDLDRQLDQHPNTQPLIDPYAAENPAEFFAVTSEYFFSAPDLLHQAYPKVYEQ 243
             +  A +++  +++        ID YAA +PAE FAV SEYFFSAP+L    +P ++++
Sbjct: 178 HDLHAAMNNIQEEIELVGENAASIDAYAASDPAECFAVLSEYFFSAPELFAPRFPSLWQR 237

Query: 244 LKAFYRQDPLARLRQLQAED 263
              FY+QDPL RL      D
Sbjct: 238 FCQFYQQDPLQRLHHANDTD 257