Pairwise Alignments

Query, 214 a.a., Rhs family protein from Pseudomonas fluorescens FW300-N2E2

Subject, 1397 a.a., rhsC element core protein RshC (NCBI) from Escherichia coli BW25113

 Score =  108 bits (269), Expect = 6e-28
 Identities = 53/111 (47%), Positives = 66/111 (59%), Gaps = 2/111 (1%)

Query: 45   PDARPFYYHLDHLGTPQELTNPAGQIVWSARYNGYGQLTELQHGGGEQLEQPLRFQGQYF 104
            P  +   YH DH G P  L +  G   W A Y+ +G L  L      QL+Q +R  GQ +
Sbjct: 1139 PARKIHLYHCDHRGLPLALISTEGTTAWYAEYDEWGNL--LNEENPHQLQQLIRLPGQQY 1196

Query: 105  DPESGLHYNRHRYYNPGTGRYLTSDPSKLAGGLNGYRYTVNPTGWVDPLGL 155
            D ESGL+YNRHRYY+P  GRY+T DP  L GG N Y+Y +NP   +DPLGL
Sbjct: 1197 DEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPISNIDPLGL 1247



 Score = 32.0 bits (71), Expect = 6e-05
 Identities = 12/36 (33%), Positives = 21/36 (58%)

Query: 6    TEFFWQGDQVVTENSSRHHRSYVYEPGTFRPLAMLD 41
            T + W GD++ T  + R     +Y+PG+F PL  ++
Sbjct: 1025 TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVE 1060