Pairwise Alignments

Query, 214 a.a., Rhs family protein from Pseudomonas fluorescens FW300-N2E2

Subject, 1426 a.a., rhsD element protein (NCBI) from Escherichia coli BW25113

 Score =  109 bits (273), Expect = 2e-28
 Identities = 57/133 (42%), Positives = 72/133 (54%), Gaps = 5/133 (3%)

Query: 45   PDARPFYYHLDHLGTPQELTNPAGQIVWSARYNGYGQLTELQHGGGEQLEQPLRFQGQYF 104
            P  +   YH DH G P  L +  G   WSA Y+ +G   +L       + QP R  GQ  
Sbjct: 1150 PARKAHLYHCDHRGLPLALISEDGNTAWSAEYDEWGN--QLNEENPHHVYQPYRLPGQQH 1207

Query: 105  DPESGLHYNRHRYYNPGTGRYLTSDPSKLAGGLNGYRYTVNPTGWVDPLGLV---DCPGK 161
            D ESGL+YNRHRYY+P  GRY+T DP  L GG N Y+Y +NP   +DP+GL+   D    
Sbjct: 1208 DEESGLYYNRHRYYDPLQGRYITQDPMGLKGGWNLYQYPLNPLQQIDPMGLLQTWDDARS 1267

Query: 162  GGCRPAVGGRIRR 174
            G C   V G + R
Sbjct: 1268 GACTGGVCGVLSR 1280



 Score = 32.7 bits (73), Expect = 4e-05
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 6    TEFFWQGDQVVTENSSRHHRSYVYEPGTFRPLAMLDGE 43
            T + W GD++ T  +       VYEPG+F PL  ++ E
Sbjct: 1036 TWYGWDGDRLTTVQTDTTRIQTVYEPGSFTPLIRVETE 1073



 Score = 25.8 bits (55), Expect = 0.004
 Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 6/73 (8%)

Query: 75  RYNGYGQLTELQHGGGEQLEQPLRFQGQY-FDPESGLHYNRHRYYNPGTGRYLTSDPSKL 133
           +Y+G+G LT++ H     L +  R    Y +D +  L        NP TG  L    +K 
Sbjct: 723 QYDGHGWLTDISH-----LSEGHRVAVHYGYDDKGRLTGECQTVENPETGELLWQHETKH 777

Query: 134 AGGLNGYRYTVNP 146
           A    G    V P
Sbjct: 778 AYNEQGLANRVTP 790