Pairwise Alignments

Query, 652 a.a., DNA primase (EC 2.7.7.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 597 a.a., DNA primase from Rhodanobacter sp000427505 FW510-R12

 Score =  456 bits (1174), Expect = e-132
 Identities = 275/662 (41%), Positives = 375/662 (56%), Gaps = 92/662 (13%)

Query: 1   MAGLIPQSFIDDLLNRTDIVDVVSSRLQMKKAGKNYTACCPFHKEKTPSFSVSPDKQFYY 60
           M GLIP SFID+LL R DIVDV+  R+ +KKAG+ +TACCPFH E+TPSF VSP KQF++
Sbjct: 1   MRGLIPDSFIDELLARVDIVDVIERRVPLKKAGREWTACCPFHNERTPSFYVSPAKQFFH 60

Query: 61  CFGCGAGGNALGFIMDHDNLDFPQAVEELAKAAGMEIPREESGRQHKPRQPTDSPLYPLL 120
           CFGCGA G+A+ F+MD++ L+FP AVEELA++ G+ +PRE  GR  +PR+   + LY LL
Sbjct: 61  CFGCGAHGSAVKFLMDYERLEFPDAVEELAQSVGLTVPRE-GGRDERPREDK-TDLYALL 118

Query: 121 TAAADFYRQALKSHPARKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNLYKHLSSDTLQQ 180
            AA  +Y   L   P    A  Y + RGL  E  + F LG+AP G+D + K L +   + 
Sbjct: 119 DAATAWYEGEL---PRSADAQAYCRKRGLDAETIKRFRLGWAPAGYDGVIKALGNTPRRM 175

Query: 181 RAMIDAGLLIENAETGKRYDRFRDRVMFPIRDTRGRIIAFGGRVLGD------------- 227
             + +AG+ + ++E G +YDRFR+R+MFPI D RGR+IAFGGR++               
Sbjct: 176 ELLNEAGM-VASSERGSKYDRFRERLMFPILDRRGRVIAFGGRIISSAPPAREDQEAGIP 234

Query: 228 -------DKPKYLNSPETPVFHKGQELYGLYEARKNNRNLDEIIVVEGYMDVIALAQQGL 280
                    PKYLNSPETP+FHKG+EL+ L++ ++ N  L+ I+VVEGYMDVIAL Q GL
Sbjct: 235 ARTSQQSSSPKYLNSPETPLFHKGRELFALWQVKQANPKLERIVVVEGYMDVIALHQAGL 294

Query: 281 RNAVATLGTATSEEHMKRLFRVVPNVLFCFDGDQAGRNAAWRALEATLPCLQDGRRARFL 340
             AVATLGTAT+ EH + LFR  P+V+FCFDGD+AGR AAW+ALEA LP L+DGR+A FL
Sbjct: 295 PVAVATLGTATTPEHTEVLFRAAPDVVFCFDGDRAGRAAAWKALEAALPRLRDGRQAYFL 354

Query: 341 FLPEGEDPDTLVRSEGTDAFRARINQHAQPLADYFFQQLTEEADPRSLEGKAHMATLAAP 400
           FLP+GEDPDTLVR EG + F  RI + A PL+DYFF +L  + D  SL+G+A +A  A P
Sbjct: 355 FLPDGEDPDTLVRKEGKEGFEKRIRE-AMPLSDYFFNELARDVDMASLDGRARLAERARP 413

Query: 401 LIDKVPGANLRTLMRQRLSEITGLNSEAVNQLVHSAPQEAPPAYDPGIDYDAMPDFADYH 460
           LI ++P    R LM Q L + +G            A  +A PA    +            
Sbjct: 414 LIARLPDGAFRDLMAQELEKRSGAR----------AVLQADPATRRAV------------ 451

Query: 461 QPQQDYAPQQEWTPKKTGSGGKKWDKKPWDKNGKRGDRDQPRAPRVPAAVEPPTLAALRT 520
             Q+  A Q+                       + G  DQ   P     ++ P +A L  
Sbjct: 452 --QRPTAVQRSLVRSAISL-----------LLAQPGMADQVERPYRFLRLDKPGVALLAE 498

Query: 521 LLHHPQLAEKVEDAGHFAAEDHSNTQLLVALLEAVQKNPKLNSFQLIARWHGTEQGRLLK 580
           LL   +    +  A                L+E   + P+  S Q           +L+ 
Sbjct: 499 LLDLARARPGINSA---------------MLVEHFAERPEYPSLQ-----------KLMA 532

Query: 581 ALAEKEWLIEGDNLEQQFFDTITSLSARQRERNLEQLLRKARQSELTSEEKNQLRDLLSR 640
           ALA    + E +    +FFD +  +  +   +  + L  K+R+S L   EK +LR+LL+ 
Sbjct: 533 ALA----VGEPEAQRSEFFDALARMEDQAATQRRDALTAKSRESTLDPAEKAELRELLAA 588

Query: 641 NV 642
            V
Sbjct: 589 RV 590