Pairwise Alignments

Query, 652 a.a., DNA primase (EC 2.7.7.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 629 a.a., DNA primase DnaG from Sphingobium sp. HT1-2

 Score =  310 bits (793), Expect = 2e-88
 Identities = 174/417 (41%), Positives = 245/417 (58%), Gaps = 7/417 (1%)

Query: 4   LIPQSFIDDLLNRTDIVDVVSSRLQMKKAGKNYTACCPFHKEKTPSFSVSPDKQFYYCFG 63
           L PQ ++D+L  RT +  ++   ++++KAG+ Y ACCPFH EKTPSF+++ +K FY+CFG
Sbjct: 3   LTPQ-WLDELRARTSLSTLIGKTVKVQKAGREYKACCPFHNEKTPSFTINDEKGFYHCFG 61

Query: 64  CGAGGNALGFIMDHDNLDFPQAVEELAKAAGMEIPREESGRQHKPRQPTDSPLYPLLTAA 123
           CGA G+A+ ++ D   L F +AV+ELA  AGME+P  +     +  Q     L+  + AA
Sbjct: 62  CGAHGDAIRWMTDQRGLPFMEAVKELAATAGMEVPAADPRAAKRAEQAKG--LHDAMGAA 119

Query: 124 ADFYRQALKSHPARKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNLYKHLSSDTLQQRAM 183
             F+   L       A   YL  RG++    R FG G++P     L   L      +  +
Sbjct: 120 QSFFEDQLGGIDGGDARA-YLAKRGISDATRRTFGFGYSPDSRGKLKGALKE--FGEPML 176

Query: 184 IDAGLLIENAETGKRYDRFRDRVMFPIRDTRGRIIAFGGRVLGDDKPKYLNSPETPVFHK 243
           ++AGLLI+       YDRFR R+M PIRD RGR+IAFGGR++G  +PKYLNSP+TP+F K
Sbjct: 177 VEAGLLIDPDGERDTYDRFRGRLMLPIRDIRGRVIAFGGRIIGQGEPKYLNSPDTPLFDK 236

Query: 244 GQELYGLYEARKNNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHMKRLFRVV 303
           G+ LY +  A   +R    +IVVEGYMDVIALAQ G  ++VA LGTA +E  ++RL+++V
Sbjct: 237 GRTLYNIDRASPASRQSGRVIVVEGYMDVIALAQAGFGDSVAPLGTALTEHQIERLWKMV 296

Query: 304 PNVLFCFDGDQAGRNAAWRALEATLPCLQDGRRARFLFLPEGEDPDTLVRSEGTDAFRAR 363
              + CFDGD AG+ AA RA    LP L+ G    F  LP G+DPD L+R+EG  A  A 
Sbjct: 297 EVPILCFDGDAAGQKAAIRAATRALPLLRPGHSLAFATLPAGQDPDDLLRAEGPRAMDA- 355

Query: 364 INQHAQPLADYFFQQLTEEADPRSLEGKAHMATLAAPLIDKVPGANLRTLMRQRLSE 420
           +   AQPL D  ++   +     + E KA +    A   D +   ++R L  Q   E
Sbjct: 356 VLAGAQPLVDRLWEHEQKVGPLDTPEQKAALKQRLAAHSDSIQHPDVRALYAQAFRE 412