Pairwise Alignments

Query, 652 a.a., DNA primase (EC 2.7.7.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 623 a.a., DNA primase from Magnetospirillum magneticum AMB-1

 Score =  334 bits (857), Expect = 6e-96
 Identities = 180/399 (45%), Positives = 253/399 (63%), Gaps = 8/399 (2%)

Query: 6   PQSFIDDLLNRTDIVDVVSSRLQMKKAGKNYTACCPFHKEKTPSFSVSPDKQFYYCFGCG 65
           P  F+D+L  R  +  VV+ R+++ + G+ +   CPFH EKTPSF+V+ DK F++CFGCG
Sbjct: 4   PPQFLDELRARIPVTSVVARRVKLVRKGREHQGLCPFHNEKTPSFTVNEDKGFFHCFGCG 63

Query: 66  AGGNALGFIMDHDNLDFPQAVEELAKAAGMEIPREESGRQHKPRQPTDSPLYPLLTAAAD 125
           A G+A+GF M   +L F +AVE+LA  AG+E+P+  +  + + R+   + L+  L AA+ 
Sbjct: 64  AHGDAIGFEMRAGHLSFTEAVEKLAAEAGIEVPK--ASPEERVREQRRASLHDALEAASA 121

Query: 126 FYRQALKSHPARKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNLYKHLSSDTLQQRAMID 185
           F+ + L+  PA +    YLK RGL+ +    F LGFAP   + L   L S    +  +I+
Sbjct: 122 FFEKHLRG-PAGRDGFAYLKNRGLSDDTIARFRLGFAPDSREALKSALMSKECPESLLIE 180

Query: 186 AGLLIENAETGKRYDRFRDRVMFPIRDTRGRIIAFGGRVLGDDKPKYLNSPETPVFHKGQ 245
           AGLL +  E+G  +D FR RVMFPI D RGR+I FG R LGD +PKYLNSP+TP+FHKGQ
Sbjct: 181 AGLL-KKPESGASFDYFRGRVMFPITDRRGRVIGFGARTLGDGQPKYLNSPDTPLFHKGQ 239

Query: 246 ELYGLYEARKNNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHMKRLFRVVPN 305
            LYGL  AR+  R L+ ++VVEGYMDVIAL Q G   AVA LGTA +E+ ++ L+R+ P 
Sbjct: 240 TLYGLAHAREMARELNRVVVVEGYMDVIALHQAGFAYAVAPLGTAVTEQQIEELWRLAPE 299

Query: 306 VLFCFDGDQAGRNAAWRALEATLPCLQDGRRARFLFLPEGEDPDTLVRSEGTDAFRARIN 365
            + C DGD+AG+ A  RALE   P L+ G+  RF  LP  EDPD+L+++ G  A  A ++
Sbjct: 300 PILCLDGDKAGQRAMERALERAFPILKPGQSLRFATLPAPEDPDSLIKARGPAAMAAVLD 359

Query: 366 QHAQPLADYFFQQLTEEADPRSLEGKAHMATLAAPLIDK 404
             AQPL +  ++  T++   R L+     A L   L DK
Sbjct: 360 A-AQPLVEVAWRVATQD---RPLDTPERRALLEKELSDK 394