Pairwise Alignments

Query, 652 a.a., DNA primase (EC 2.7.7.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 582 a.a., DNA primase from Serratia liquefaciens MT49

 Score =  503 bits (1295), Expect = e-147
 Identities = 284/637 (44%), Positives = 392/637 (61%), Gaps = 63/637 (9%)

Query: 1   MAGLIPQSFIDDLLNRTDIVDVVSSRLQMKKAGKNYTACCPFHKEKTPSFSVSPDKQFYY 60
           MAG IP+ FI+DLL RTDIVD++ +R+++KK GKNY ACCPFH EKTPSF+V+ +KQFY+
Sbjct: 1   MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNYHACCPFHHEKTPSFTVNGEKQFYH 60

Query: 61  CFGCGAGGNALGFIMDHDNLDFPQAVEELAKAAGMEIPREESGRQHKPRQPTDSPLYPLL 120
           CFGCGA GNA+ F+M++D L+F + +EELA   G+E+P E      +  +     LY L+
Sbjct: 61  CFGCGAHGNAVDFLMNYDRLEFVETIEELATMHGLEVPYEAGSGPTQIERHQRQSLYQLM 120

Query: 121 TAAADFYRQALKSHPARKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNLYKHLSSDTLQQ 180
              + FY+Q+L       A  +YL+ RGL+ ++ R F +GFAP GWDN  K    D   +
Sbjct: 121 EQLSAFYQQSLHQSSGTPAR-NYLQQRGLSDDVIRHFAIGFAPAGWDNALKRFGRDAESR 179

Query: 181 RAMIDAGLLIENAETGKRYDRFRDRVMFPIRDTRGRIIAFGGRVLGDDKPKYLNSPETPV 240
            A+ DAG+L+ N + G+ YDRFR+RVMFPIRD RGR+IAFGGRVLGD  PKYLNSPET V
Sbjct: 180 LALNDAGMLVTN-DQGRSYDRFRERVMFPIRDKRGRVIAFGGRVLGDGMPKYLNSPETEV 238

Query: 241 FHKGQELYGLYEARKNNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHMKRLF 300
           FHKG++LYGLYEA++++     ++VVEGYMDV+ALAQ G+  AVA+LGT+T+ EH++ LF
Sbjct: 239 FHKGRQLYGLYEAQQSHPTPQRLLVVEGYMDVVALAQYGIDYAVASLGTSTTAEHIQLLF 298

Query: 301 RVVPNVLFCFDGDQAGRNAAWRALEATLPCLQDGRRARFLFLPEGEDPDTLVRSEGTDAF 360
           R   NV+ C+DGD+AGR AAWRALE  LP L DGR+ RF+FLP+GEDPDTLVR EG +AF
Sbjct: 299 RATDNVVCCYDGDRAGREAAWRALETALPYLNDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358

Query: 361 RARINQHAQPLADYFFQQLTEEADPRSLEGKAHMATLAAPLIDKVPGANLRTLMRQRLSE 420
             R+ Q AQPL+ + F+ L  + D  S +G+A ++TLA PLI +VPG  LR  +RQ+L  
Sbjct: 359 EQRMEQ-AQPLSTFLFETLMPQVDLSSPDGRAKLSTLALPLITQVPGETLRLYLRQQLGS 417

Query: 421 ITGLNSEAVNQLVHSAPQEAPPAYDPGIDYDAMPDFADYHQPQQDYAPQQEWTPKKTGSG 480
             GL  +  +QL    P++A              + A+ +Q     APQ + T  +   G
Sbjct: 418 KLGLLDD--SQLDKLMPKQA--------------ENANTYQ-----APQLKRTTMRILIG 456

Query: 481 GKKWDKKPWDKNGKRGDRDQPRAPRVPAAVEPPTLAALRTLLHHPQLAEKVEDAGHFAAE 540
                                        V+ P LA   TL+   +  E+ + AG     
Sbjct: 457 ---------------------------LLVQNPQLA---TLIPSLEGLEQTKQAG----- 481

Query: 541 DHSNTQLLVALLEAVQKNPKLNSFQLIARWHGTEQGRLLKALAEKEWLIEGDNLEQQFFD 600
                 L V L++     P L + QL+ ++   +  + L+ LA    +I  D +EQ F D
Sbjct: 482 ----LPLFVELVQTCLAQPGLTTGQLLEQYRDNKLSQQLETLATWNHMIVEDMVEQTFLD 537

Query: 601 TITSLSARQRERNLEQLLRKARQSELTSEEKNQLRDL 637
           T+ SL     E+ LE L+ +AR   L+ EE+ ++R L
Sbjct: 538 TLASLYDSVLEQRLETLIAQARTHGLSPEEREEVRSL 574