Pairwise Alignments

Query, 652 a.a., DNA primase (EC 2.7.7.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 581 a.a., DNA primase from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  476 bits (1224), Expect = e-138
 Identities = 232/440 (52%), Positives = 318/440 (72%), Gaps = 5/440 (1%)

Query: 1   MAGLIPQSFIDDLLNRTDIVDVVSSRLQMKKAGKNYTACCPFHKEKTPSFSVSPDKQFYY 60
           MAG IP+ FI+DLL RTDIVD++ +R+++KK GKN+ ACCPFH EKTPSF+V+ +KQFY+
Sbjct: 1   MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60

Query: 61  CFGCGAGGNALGFIMDHDNLDFPQAVEELAKAAGMEIPREESGRQHKPRQPTDSPLYPLL 120
           CFGCGA GNA+ F+M++D L+F + VEELA    +E+P E      +  +     LY L+
Sbjct: 61  CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120

Query: 121 TAAADFYRQALKSHPARKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNLYKHLSSDTLQQ 180
                FY+Q+L+  P   +A  YL+ RGL+ E+   F +GFAPPGWDN+ K    +   +
Sbjct: 121 DGLNTFYQQSLQQ-PVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179

Query: 181 RAMIDAGLLIENAETGKRYDRFRDRVMFPIRDTRGRIIAFGGRVLGDDKPKYLNSPETPV 240
           +++IDAG+L+ N + G+ YDRFR+RVMFPIRD RGR+I FGGRVLG+D PKYLNSPET +
Sbjct: 180 QSLIDAGMLVTN-DQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238

Query: 241 FHKGQELYGLYEARKNNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHMKRLF 300
           FHKG++LYGLYEA+++N   + ++VVEGYMDV+ALAQ G+  AVA+LGT+T+ +H++ LF
Sbjct: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298

Query: 301 RVVPNVLFCFDGDQAGRNAAWRALEATLPCLQDGRRARFLFLPEGEDPDTLVRSEGTDAF 360
           R   NV+ C+DGD+AGR+AAWRALE  LP + DGR+ RF+FLP+ EDPDTLVR EG +AF
Sbjct: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDDEDPDTLVRKEGKEAF 358

Query: 361 RARINQHAQPLADYFFQQLTEEADPRSLEGKAHMATLAAPLIDKVPGANLRTLMRQRLSE 420
            AR+ Q A PL+ + F  L  + D  + +G+A ++TLA PLI +VPG  LR  +RQ L  
Sbjct: 359 EARMEQ-AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417

Query: 421 ITGLNSEAVNQLVHSAPQEA 440
             G+  +  +QL    P+ A
Sbjct: 418 KLGILDD--SQLERLMPKAA 435