Pairwise Alignments

Query, 652 a.a., DNA primase (EC 2.7.7.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 661 a.a., DNA primase from Agrobacterium fabrum C58

 Score =  278 bits (712), Expect = 4e-79
 Identities = 162/421 (38%), Positives = 240/421 (57%), Gaps = 14/421 (3%)

Query: 8   SFIDDLLNRTDIVDVVSSRLQMKKAGKN-----YTACCPFHKEKTPSFSVSPDKQFYYCF 62
           SF+D++ +R +I DV+  R+   K   N     Y ACCPFH EK+PSF     K  Y+CF
Sbjct: 6   SFLDEIRDRVNISDVIGRRVSWDKKKTNAPRGDYWACCPFHGEKSPSFHCEDRKGRYHCF 65

Query: 63  GCGAGGNALGFIMDHDNLDFPQAVEELAKAAGMEIPREESGRQHKPRQPTDSPLYPLLTA 122
           GCG  G+   F+ + + L FP+AV+++A  AG+ +P+ +   + + R+ T   L  ++  
Sbjct: 66  GCGVSGDHFRFLTELEGLSFPEAVQQIADMAGISMPQPDPQAEKRERERTS--LQDVMEM 123

Query: 123 AADFYRQALKSHPARKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNLYKHLSSDTLQQRA 182
           A  F++  L++    +A   YL+ RGLTG     F LG+AP   + L +HL+S  + +  
Sbjct: 124 ATLFFQDQLQTSLGARARA-YLRDRGLTGRTIETFRLGYAPDSRNALKEHLASKGVSKEQ 182

Query: 183 MIDAGLLI-ENAETGKRYDRFRDRVMFPIRDTRGRIIAFGGRVLGDDK-PKYLNSPETPV 240
           M   GL++ EN      YDRFRDR+MFPI  +R ++IAFGGR +  D   KYLNS ET +
Sbjct: 183 MEACGLVVHENVPVS--YDRFRDRIMFPILSSREKVIAFGGRAMAADAVAKYLNSNETEL 240

Query: 241 FHKGQELYGLYEARKNNRNLD-EIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHMKRL 299
           FHKG  LY    AR+ ++     +I VEGYMDVIAL Q G+ NAVA LGTA ++  +  L
Sbjct: 241 FHKGNVLYNFARARRASQAAGGTVIAVEGYMDVIALYQAGVENAVAPLGTALTDSQLDLL 300

Query: 300 FRVVPNVLFCFDGDQAGRNAAWRALEATLPCLQDGRRARFLFLPEGEDPDTLVRSEGTDA 359
           +++ P  + CFDGD AG  AA RA +  LP ++  R   F  LP+G+DPD LVR EG   
Sbjct: 301 WKMSPQPVLCFDGDGAGIRAANRAADLALPHIKPDRSVSFALLPDGKDPDDLVRLEGRAP 360

Query: 360 FRARINQHAQPLADYFFQQLTEEADPRSLEGKAHMATLAAPLIDKVPGANLRTLMRQRLS 419
           F  R+   A+PLA   + + T      + E +A + +    ++  +    +R   +Q + 
Sbjct: 361 F-DRVLSEAKPLAAMIWSRETSGVTFDTPEKRAQLESRLRQIVTVIADETVRRFYQQDMR 419

Query: 420 E 420
           +
Sbjct: 420 D 420