Pairwise Alignments

Query, 295 a.a., Protein rarD from Pseudomonas fluorescens FW300-N2E2

Subject, 294 a.a., chloramphenical resistance permease RarD from Pseudomonas simiae WCS417

 Score =  531 bits (1368), Expect = e-156
 Identities = 254/294 (86%), Positives = 276/294 (93%)

Query: 1   MQAANPRRGYILGLSAYIIWGLFPIYFKAIASVPSVEIIIHRVLWSALFGAALLLVWKHP 60
           MQAANPR+GYILGLSAY+IWGLFP+YFKAIASVP+ EII+HRVLWSALFG  LL+VWKHP
Sbjct: 1   MQAANPRKGYILGLSAYVIWGLFPLYFKAIASVPAAEIIVHRVLWSALFGGLLLMVWKHP 60

Query: 61  GWWRELRDNPQRLAILALSGTLIAANWLTYVWAVNNERMLEASLGYYINPLVNVLLGMLI 120
           GW+RELRDNP+RLAILALSG+LIA NWLTYVW+VN  RMLEASLGYYINPLVNV+LGMLI
Sbjct: 61  GWFRELRDNPKRLAILALSGSLIAGNWLTYVWSVNTGRMLEASLGYYINPLVNVVLGMLI 120

Query: 121 LGERLRRMQWLAVGLAAVGVAQQVWQVGSLPWVSLVLALTFGFYGLIRKQAPVKALPGLV 180
           LGERLRR+QW+AVGLAAVGVAQQVWQVGSLPWVSLVLALTFGFYGLIRKQAPVKALPGLV
Sbjct: 121 LGERLRRLQWVAVGLAAVGVAQQVWQVGSLPWVSLVLALTFGFYGLIRKQAPVKALPGLV 180

Query: 181 VETWMLVPIAIAWLLFNPTATSAQAAFWTTSEAWWLVAAGPVTLVPLVCFNAATRHLPYT 240
           VETWMLVPIA+AWLLFNPTA SAQ AFW+TSEAWWLVAAGPVTL+PLVCFNAA RHLPYT
Sbjct: 181 VETWMLVPIAVAWLLFNPTAHSAQMAFWSTSEAWWLVAAGPVTLIPLVCFNAAARHLPYT 240

Query: 241 TIGFLQYIAPTLVLLLAVMLFGEHLSSSTLVAFLFIWAGLAVYSVDAVISMRRR 294
            +GFLQY+APTLVLL AV+LFGEHL+ STL AF FIWAGL VYSVD  +S R+R
Sbjct: 241 ALGFLQYVAPTLVLLEAVLLFGEHLAPSTLTAFAFIWAGLVVYSVDIWLSARKR 294