Pairwise Alignments

Query, 295 a.a., Protein rarD from Pseudomonas fluorescens FW300-N2E2

Subject, 295 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  523 bits (1348), Expect = e-153
 Identities = 251/295 (85%), Positives = 277/295 (93%)

Query: 1   MQAANPRRGYILGLSAYIIWGLFPIYFKAIASVPSVEIIIHRVLWSALFGAALLLVWKHP 60
           M AANPRRGYILGLSAYIIWGLFP+YFKAI SVP+VEII+HRVLWSALFG+ LLLVWKHP
Sbjct: 1   MHAANPRRGYILGLSAYIIWGLFPLYFKAIQSVPAVEIIVHRVLWSALFGSLLLLVWKHP 60

Query: 61  GWWRELRDNPQRLAILALSGTLIAANWLTYVWAVNNERMLEASLGYYINPLVNVLLGMLI 120
           GWWRELR+NP+RL ILALSG LIA NWLTYVW+VNN RMLEASLGYYINPL+NVLLGMLI
Sbjct: 61  GWWRELRNNPRRLGILALSGALIAGNWLTYVWSVNNGRMLEASLGYYINPLINVLLGMLI 120

Query: 121 LGERLRRMQWLAVGLAAVGVAQQVWQVGSLPWVSLVLALTFGFYGLIRKQAPVKALPGLV 180
           LGERLRR+QWLAVG+AAVGVAQQVWQVGSLPWVSLVLAL+FGFYGLIRKQAPV ALPGLV
Sbjct: 121 LGERLRRLQWLAVGMAAVGVAQQVWQVGSLPWVSLVLALSFGFYGLIRKQAPVAALPGLV 180

Query: 181 VETWMLVPIAIAWLLFNPTATSAQAAFWTTSEAWWLVAAGPVTLVPLVCFNAATRHLPYT 240
           VETWMLVP+A+ WLL +PTA SAQ AF+T+SEA WL+AAGPVTLVPLVCFNAA RHLPYT
Sbjct: 181 VETWMLVPLALGWLLLHPTAMSAQGAFYTSSEALWLMAAGPVTLVPLVCFNAAARHLPYT 240

Query: 241 TIGFLQYIAPTLVLLLAVMLFGEHLSSSTLVAFLFIWAGLAVYSVDAVISMRRRS 295
           T+GFLQY+APTLVLL AV+LF EHLSSSTL AF+FIWAGLA+YSVDA +++R+RS
Sbjct: 241 TLGFLQYLAPTLVLLQAVVLFDEHLSSSTLAAFMFIWAGLAIYSVDAWLNLRKRS 295