Pairwise Alignments

Query, 295 a.a., Protein rarD from Pseudomonas fluorescens FW300-N2E2

Subject, 263 a.a., Chloramphenicol-sensitive protein rarD from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  125 bits (314), Expect = 1e-33
 Identities = 77/243 (31%), Positives = 132/243 (54%), Gaps = 5/243 (2%)

Query: 53  LLLVWKHPGWWRELRDNPQRLAILALSGTLIAANWLTYVWAVNNERMLEASLGYYINPLV 112
           L  V++    +R+L  +  +L ++A+   ++A  W  Y++ V N R+LEA LGYY+ P+ 
Sbjct: 7   LFFVYRKGAQFRQLVRDVTKLPVVAVCAAILAVWWFLYMYCVTNNRVLEAGLGYYLGPIF 66

Query: 113 NVLLGMLILGERLRRMQWLAVGLAAVGVAQQ-VWQVGSLPWVSLVLALTFGFYGLIRKQA 171
            V++GM+ L ER+ R    +V ++  G+    +   GS P++++ L L +  Y  + K+A
Sbjct: 67  TVVMGMVFLRERIDRWSAASVLVSFAGIGYYAIATQGSFPFLAIGLGLCYAGY-TVYKRA 125

Query: 172 PVKALPGLVVETWMLVPIAIAWLLF-NPTATSAQAAFWTTS--EAWWLVAAGPVTLVPLV 228
            V     + V   +L  +  A L+F +     +  +F TTS  +   L   G + ++P+ 
Sbjct: 126 NVNFDAQVSVALELLALLPAAMLIFAHYVQQGSLQSFRTTSLTDNVLLFMLGVINVLPMW 185

Query: 229 CFNAATRHLPYTTIGFLQYIAPTLVLLLAVMLFGEHLSSSTLVAFLFIWAGLAVYSVDAV 288
            +  ATR+LP   + FLQYI+PT   LLAV  F E  S  +L+ FL +W G+ +Y+V  +
Sbjct: 186 WYTVATRNLPTVPMSFLQYISPTCNFLLAVFWFAEPFSRHSLIMFLLVWTGVGIYTVRTI 245

Query: 289 ISM 291
             M
Sbjct: 246 HRM 248