Pairwise Alignments

Query, 295 a.a., Protein rarD from Pseudomonas fluorescens FW300-N2E2

Subject, 296 a.a., putative chloramphenical resistance permease from Escherichia coli BL21

 Score =  287 bits (735), Expect = 2e-82
 Identities = 143/295 (48%), Positives = 195/295 (66%)

Query: 1   MQAANPRRGYILGLSAYIIWGLFPIYFKAIASVPSVEIIIHRVLWSALFGAALLLVWKHP 60
           M A   R+G +L L+AY IWG+ P YFK I  VP+ EI+ HRV+WS  F   L+ + +  
Sbjct: 1   MDAKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQW 60

Query: 61  GWWRELRDNPQRLAILALSGTLIAANWLTYVWAVNNERMLEASLGYYINPLVNVLLGMLI 120
            + + L   PQ++ +LA+S  LI  NWL ++WAVNN  MLEASLGY+INPLVN++LGM+ 
Sbjct: 61  SYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIF 120

Query: 121 LGERLRRMQWLAVGLAAVGVAQQVWQVGSLPWVSLVLALTFGFYGLIRKQAPVKALPGLV 180
           LGER RRMQWLAV LA  GV  Q+W  GSLP ++L LA +F FYGL+RK+  V+A  G++
Sbjct: 121 LGERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGML 180

Query: 181 VETWMLVPIAIAWLLFNPTATSAQAAFWTTSEAWWLVAAGPVTLVPLVCFNAATRHLPYT 240
           +ET  L+P+A  +L     ++++       S    L+AAG VT VPL+CF AA   L  +
Sbjct: 181 IETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLS 240

Query: 241 TIGFLQYIAPTLVLLLAVMLFGEHLSSSTLVAFLFIWAGLAVYSVDAVISMRRRS 295
           T+GF QYI PTL+ LLAV  +GE   +  +V F FIW  LA++ +DA+ + RR S
Sbjct: 241 TLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQRRTS 295