Pairwise Alignments

Query, 324 a.a., Transmembrane sensor from Pseudomonas fluorescens FW300-N2E2

Subject, 331 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  486 bits (1252), Expect = e-142
 Identities = 245/323 (75%), Positives = 276/323 (85%), Gaps = 2/323 (0%)

Query: 1   MSQAHAKPVSASVLDAAIAWQLSLDSS--SAQEREAFAQWHAADEEHARAWRQLGMLDQR 58
           M+   ++PVSA VLDAAIAWQLSLDS   SA ERE F +W A+DEEHARAWRQLGMLDQR
Sbjct: 1   MTVISSRPVSARVLDAAIAWQLSLDSGDGSAIEREEFDKWLASDEEHARAWRQLGMLDQR 60

Query: 59  FSVANGPARAALLQSRVSIRRRIRKVGSGLASVIAAIGLALFAGDRYLPLDYWLADQRTA 118
           FSVA+GPARAALLQSR  IR+R+RK+GSGLASV   IGLALFAG+RY+P+ YWLADQRTA
Sbjct: 61  FSVASGPARAALLQSREGIRQRVRKLGSGLASVALVIGLALFAGERYVPIHYWLADQRTA 120

Query: 119 TGEQRTLRLDDGTLINLNTHSALDVRFDDKQRRIVLQEGEILVETGHDDPRPFIVETREG 178
           TGEQRTL+L DGTLINLNTHSA+DVRFD+K+R +VLQEGEILVETGH+D RPF V+TR+G
Sbjct: 121 TGEQRTLKLSDGTLINLNTHSAIDVRFDEKRRLVVLQEGEILVETGHNDERPFYVQTRDG 180

Query: 179 RLRALGTRFLVKREDEGTRLSVLKSAVAAHPQATDQEQILREGQQVLMRRDGLGPTLALN 238
            LRALGTRF+VKRED+ TRLSVL+SAVAA P+A  QEQ+ +EGQQVLMR DGLGP LA+ 
Sbjct: 181 SLRALGTRFIVKREDDATRLSVLQSAVAAQPEALHQEQVFKEGQQVLMRSDGLGPLLAVT 240

Query: 239 PGADAWTRGMLVVDNARLEDLVHELGRYRRGYLGVEPQVADLRITGSFPLHDTDLALTAL 298
           P  DAWTRGMLVVDNARL ++V EL RYR GYLGV+  VADLRITGSFPLHDT LAL AL
Sbjct: 241 PATDAWTRGMLVVDNARLGEVVEELSRYRTGYLGVDKNVADLRITGSFPLHDTTLALNAL 300

Query: 299 LPTLPVQVEHHTRWWVVVGPRAK 321
           LPTLPV +E HT WWV V   AK
Sbjct: 301 LPTLPVHIEQHTPWWVTVKATAK 323